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Rtp1 Gene Detail
Summary
  • Symbol
    Rtp1
  • Name
    receptor transporter protein 1
  • Synonyms
    LOC239766, LOC385871
  • Feature Type
    protein coding gene
  • IDs
    MGI:2685450
    NCBI Gene: 239766
Location & Maps
more
  • Sequence Map
    Chr16:23429133-23433960 bp, + strand
  • From Ensembl annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      4828 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 16, 14.21 cM
  • Mapping Data
    1 experiment
Homology
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  • Human Ortholog
    RTP1, receptor transporter protein 1
  • Vertebrate Orthologs
    7
  • Human Ortholog
    RTP1, receptor transporter protein 1
    Orthology source: HomoloGene, HGNC
  • Synonyms
    Z3CXXC1
  • Links
    NCBI Gene ID: 132112
    neXtProt AC: NX_P59025

  • Chr Location
    3q27.3; chr3:187197486-187201465 (+)  GRCh38.p2

Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    2 phenotypes from 1 allele in 1 genetic background
    3 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Mice homozygous for a knock-out allele exhibit infertility and abnormal olfactory bulb development.
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
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  • cDNA Data
  • Literature Summary
Interactions
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Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000033383 Ensembl Gene Model | MGI Sequence Detail 4828 C57BL/6J ±  kb
transcript ENSMUST00000038730 Ensembl | MGI Sequence Detail 3120 Not Applicable  
polypeptide ENSMUSP00000043416 Ensembl | MGI Sequence Detail 263 Not Applicable  
For the selected sequence
Polymorphisms
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  • SNPs within 2kb
    58 from dbSNP Build 142
Protein
Information
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  • UniProt
    3 Sequences
  • Protein Ontology
    PR:000014353 receptor-transporting protein 1
  • InterPro Domains
    IPR026096 Receptor-transporting protein
    IPR026692 Receptor-transporting protein 1
    IPR027377 Zinc-binding domain
Molecular
Reagents
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  • All nucleic 5
    cDNA 5

    Microarray probesets 1
Other
Accession IDs
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MGI:2686612
References
more
  • Summaries
    All 20
    Developmental Gene Expression 1
    Gene Ontology 3
    Phenotypes 3
  • Earliest
    J:162220 Magdaleno S, et al., BGEM: an in situ hybridization database of gene expression in the embryonic and adult mouse nervous system. PLoS Biol. 2006 Apr;4(4):e86
  • Latest
    J:191236 Wang SZ, et al., Transcription factor ATF5 is required for terminal differentiation and survival of olfactory sensory neurons. Proc Natl Acad Sci U S A. 2012 Nov 6;109(45):18589-94

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
09/13/2016
MGI 6.05
The Jackson Laboratory