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Plcxd1
Gene Detail
 Symbol
Name
ID
Plcxd1
phosphatidylinositol-specific phospholipase C, X domain containing 1
MGI:2685422
Synonyms A330045H12Rik, LOC231597
Feature Type protein coding gene
Genetic Map
Chromosome 5
53.30 cM
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr5:110099969-110105953 bp, + strand
From VEGA annotation of GRCm38

  5985 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:138628  Vertebrate Homology Class
1 mouse; 1 zebrafish

Gene Tree: Plcxd1

Mutations,
alleles, and
phenotypes
All mutations/alleles(4) : Gene trapped(1) Targeted(3)
Incidental mutations (data from Mutagenetix , APF )
Interactions
Plcxd1 interacts with 208 markers (Mir7-1, Mir7-2, Mir7b, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (3 annotations)
Process lipid metabolic process
Component cellular_component
Function phosphoric diester hydrolase activity
External Resources: FuncBase
Expression
cDNA source data(8)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(8) cDNA(8)
Microarray probesets(3)
Other database
links
VEGA Gene ModelOTTMUSG00000026195 (Evidence)
Ensembl Gene ModelENSMUSG00000064247 (Evidence)
Entrez Gene403178 (Evidence)
UniGene297057
DFCITC1588764, TC1604748
DoTSDT.101206389, DT.55257180, DT.99848511
Consensus CDS ProjectCCDS39208.2
International Mouse Knockout Project StatusPlcxd1
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000026195 VEGA Gene Model | MGI Sequence Detail 5985 C57BL/6J ±  kb
transcript OTTMUST00000064729 VEGA | MGI Sequence Detail 1346 Not Applicable 
polypeptide OTTMUSP00000032175 VEGA | MGI Sequence Detail 357 Not Applicable 

For the selected sequences
All sequences(51) RefSeq(18) UniProt(4)
Polymorphisms SNPs within 2kb(57 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR000909 Phospholipase C, phosphatidylinositol-specific , X domain
InterPro IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain
Protein Ontology PR:000030757 PI-PLC X domain-containing protein 1
References (Earliest) J:86696 Zambrowicz BP, et al., Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Proc Natl Acad Sci U S A. 2003 Nov 25;100(24):14109-14
(Latest) J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
All references(26)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
08/12/2014
MGI 5.19
The Jackson Laboratory