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A130030D18Rik Gene Detail
Summary
  • Symbol
    A130030D18Rik
  • Name
    RIKEN cDNA A130030D18 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:2685404
    NCBI Gene: 228116
  • Alliance
Location &
Maps
more
  • Sequence Map
    Chr2:82375372-82392202 bp, - strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 2, 49.08 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    45 from dbSNP Build 142
  • Strain Annotations
    17
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2685404
lncRNA gene Chr2:82375358-82392202 (-)
129S1/SvImJ MGP_129S1SvImJ_G0005955
lincRNA gene Chr2:83032382-83051952 (-)
A/J MGP_AJ_G0005948
lincRNA gene Chr2:79816243-79833428 (-)
AKR/J MGP_AKRJ_G0005923
lincRNA gene Chr2:81911831-81928562 (-)
BALB/cJ MGP_BALBcJ_G0005926
lincRNA gene Chr2:79976982-79993507 (-)
C3H/HeJ MGP_C3HHeJ_G0005874
lincRNA gene Chr2:82193658-82209777 (-)
C57BL/6NJ MGP_C57BL6NJ_G0006087
lincRNA gene Chr2:85528483-85549671 (-)
CAROLI/EiJ no annotation
CAST/EiJ MGP_CASTEiJ_G0005810
lincRNA gene Chr2:82625114-82642740 (-)
CBA/J MGP_CBAJ_G0005859
lincRNA gene Chr2:88633656-88655777 (-)
DBA/2J MGP_DBA2J_G0005880
lincRNA gene Chr2:79383740-79401239 (-)
FVB/NJ MGP_FVBNJ_G0005905
lincRNA gene Chr2:78652998-78669850 (-)
LP/J MGP_LPJ_G0005959
lincRNA gene Chr2:82936046-82953833 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0005892
lincRNA gene Chr2:90748038-90767120 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0006084
lincRNA gene Chr2:82078174-82095138 (-)
PWK/PhJ MGP_PWKPhJ_G0005759
lincRNA gene Chr2:79270664-79289371 (-)
SPRET/EiJ MGP_SPRETEiJ_G0005670
lincRNA gene Chr2:82279658-82298561 (-)
WSB/EiJ MGP_WSBEiJ_G0005863
lincRNA gene Chr2:82761139-82779543 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotype references
Gene Ontology
(GO)
Classifications
less
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • cDNA Data
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000087061 Ensembl Gene Model | MGI Sequence Detail 16831 C57BL/6J ±  kb
transcript ENSMUST00000128608 Ensembl | MGI Sequence Detail 654 Not Applicable  
For the selected sequence
Molecular
Reagents
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  • All nucleic 3
    cDNA 3
References
more
  • Summaries
    All 15
    Phenotypes 5
  • Earliest
    J:100298 Spitz F, et al., Inversion-induced disruption of the Hoxd cluster leads to the partition of regulatory landscapes. Nat Genet. 2005 Aug;37(8):889-93
  • Latest
    J:269738 Guerreiro I, et al., Reorganisation of Hoxd regulatory landscapes during the evolution of a snake-like body plan. Elife. 2016 Aug 1;5

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
07/29/2020
MGI 6.15
The Jackson Laboratory