About   Help   FAQ
Atp13a3 Gene Detail
Summary
  • Symbol
    Atp13a3
  • Name
    ATPase type 13A3
  • Synonyms
    LOC224087, LOC224088, LOC385637
  • Feature Type
    protein coding gene
  • IDs
    MGI:2685387
    NCBI Gene: 224088
  • Gene Overview
    MyGene.info: ATP13A3
Location & Maps
more
  • Sequence Map
    Chr16:30312423-30388837 bp, - strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      76415 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 16, 21.26 cM
  • Mapping Data
    2 experiments
Homology
more
  • Human Ortholog
    ATP13A3, ATPase 13A3
  • Vertebrate Orthologs
    8
  • Human Ortholog
    ATP13A3, ATPase 13A3
    Orthology source: HGNC, HomoloGene
  • Synonyms
    AFURS1
  • Links
    NCBI Gene ID: 79572
    neXtProt AC: NX_Q9H7F0

  • Chr Location
    3q29; chr3:194402674-194486654 (-)  GRCh38.p2

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    4 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000028859 VEGA Gene Model | MGI Sequence Detail 76415 C57BL/6J ±  kb
transcript OTTMUST00000071476 VEGA | MGI Sequence Detail 7220 Not Applicable  
polypeptide OTTMUSP00000036631 VEGA | MGI Sequence Detail 1219 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    316 from dbSNP Build 142
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 5
    cDNA 5

    Microarray probesets 5
Other
Accession IDs
less
MGI:2146569, MGI:2685388, MGI:2686591
References
more
  • Summaries
    All 28
    Gene Ontology 5
    Phenotypes 4
  • Earliest
    J:60984 Ko MS, et al., Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Development. 2000 Apr;127(8):1737-49
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
06/22/2016
MGI 6.04
The Jackson Laboratory