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Sdr16c6 Gene Detail
Summary
  • Symbol
    Sdr16c6
  • Name
    short chain dehydrogenase/reductase family 16C, member 6
  • Synonyms
    4833413O15Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:2685269
    NCBI Gene: 242286
Location & Maps
more
  • Genetic Map
    Chromosome 4, 2.27 cM
  • Mapping Data
    1 experiment
Homology
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  • Human Ortholog
    SDR16C6P, short chain dehydrogenase/reductase family 16C, member 6, pseudogene
  • Vertebrate Orthologs
    6
  • Human Ortholog
    SDR16C6P, short chain dehydrogenase/reductase family 16C, member 6, pseudogene
    Orthology source: HGNC
  • Synonyms
    SDR16C6
  • Links
    NCBI Gene ID: 442388

  • Chr Location
    8q12.1; chr8:56374718-56390710 (-)  GRCh38.p2

Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    2 phenotype references
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
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  • cDNA Data
Interactions
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Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000004399 VEGA Gene Model | MGI Sequence Detail 21592 C57BL/6J ±  kb
transcript OTTMUST00000009971 VEGA | MGI Sequence Detail 1923 Not Applicable  
polypeptide OTTMUSP00000004776 VEGA | MGI Sequence Detail 316 Not Applicable  
For the selected sequence
Polymorphisms
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  • SNPs within 2kb
    154 from dbSNP Build 142
Protein
Information
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  • UniProt
    1 Sequence
  • Protein Ontology
    PR:000033960 short-chain dehydrogenase/reductase family 16C member 6
  • EC
  • InterPro Domains
    IPR016040 NAD(P)-binding domain
    IPR002347 Short-chain dehydrogenase/reductase SDR
Molecular
Reagents
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  • All nucleic 4
    cDNA 4

    Microarray probesets 2
References
more
  • Summaries
    All 20
    Gene Ontology 2
    Phenotypes 2
  • Earliest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
09/20/2016
MGI 6.05
The Jackson Laboratory