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Tigd4 Gene Detail
Summary
  • Symbol
    Tigd4
  • Name
    tigger transposable element derived 4
  • Synonyms
    C130063O11Rik, Tigd4
  • Feature Type
    protein coding gene
  • IDs
    MGI:2685264
    NCBI Gene: 403175
Location & Maps
more
  • Sequence Map
    Chr3:84593574-84597032 bp, + strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      3459 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 3, 37.70 cM
  • Mapping Data
    1 experiment
Homology
more
  • Human Ortholog
    TIGD4, tigger transposable element derived 4
  • Vertebrate Orthologs
    7
  • Human Ortholog
    TIGD4, tigger transposable element derived 4
    Orthology source: HomoloGene, HGNC
  • Links
    NCBI Gene ID: 201798
    neXtProt AC: NX_Q8IY51

  • Chr Location
    4q31.3; chr4:152769354-152779789 (-)  GRCh38.p2

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
  • All Mutations and Alleles
    2
  • Chemically induced (other)
    1
  • Radiation induced
    1
  • Genomic Mutations
    2 involving Tigd4
  • Incidental Mutations
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
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Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000051605 VEGA Gene Model | MGI Sequence Detail 3459 C57BL/6J ±  kb
transcript OTTMUST00000130261 VEGA | MGI Sequence Detail 3459 Not Applicable  
polypeptide OTTMUSP00000069852 VEGA | MGI Sequence Detail 513 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    33 from dbSNP Build 142
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 2
    cDNA 2

    Microarray probesets 1
References
more
  • Summaries
    All 17
    Developmental Gene Expression 2
    Gene Ontology 2
    Phenotypes 3
  • Earliest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
  • Latest
    J:172214 Davis H, et al., FBXW7 mutations typically found in human cancers are distinct from null alleles and disrupt lung development. J Pathol. 2011 Jun;224(2):180-9

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/29/2016
MGI 6.06
The Jackson Laboratory