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Ankub1 Gene Detail
Summary
  • Symbol
    Ankub1
  • Name
    ankrin repeat and ubiquitin domain containing 1
  • Synonyms
    Gm410, LOC242037
  • Feature Type
    protein coding gene
  • IDs
    MGI:2685256
    NCBI Gene: 242037
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr3:57667422-57692537 bp, - strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 3, 27.97 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    242 from dbSNP Build 142
  • Strain Annotations
    17
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2685256
protein coding gene Chr3:57657393-57692799 (-)
129S1/SvImJ MGP_129S1SvImJ_G0027231
protein coding gene Chr3:56457638-56488441 (-)
A/J MGP_AJ_G0027191
protein coding gene Chr3:54708633-54739679 (-)
AKR/J MGP_AKRJ_G0027161
protein coding gene Chr3:55843679-55873368 (-)
BALB/cJ MGP_BALBcJ_G0027204
protein coding gene Chr3:54533315-54564043 (-)
C3H/HeJ MGP_C3HHeJ_G0026947
protein coding gene Chr3:56033199-56068179 (-)
C57BL/6NJ MGP_C57BL6NJ_G0027650
protein coding gene Chr3:58555334-58588933 (-)
CAROLI/EiJ no annotation
CAST/EiJ MGP_CASTEiJ_G0026399
protein coding gene Chr3:56197717-56230707 (-)
CBA/J MGP_CBAJ_G0026923
protein coding gene Chr3:60481653-60516549 (-)
DBA/2J MGP_DBA2J_G0027057
protein coding gene Chr3:54204963-54235682 (-)
FVB/NJ MGP_FVBNJ_G0027025
protein coding gene Chr3:53183579-53215797 (-)
LP/J MGP_LPJ_G0027169
protein coding gene Chr3:57202703-57232347 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0027043
protein coding gene Chr3:64572228-64608500 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0027708
protein coding gene Chr3:55775829-55811239 (-)
PWK/PhJ MGP_PWKPhJ_G0026131
protein coding gene Chr3:53853767-53890471 (-)
SPRET/EiJ MGP_SPRETEiJ_G0025944
protein coding gene Chr3:55460473-55490850 (-)
WSB/EiJ MGP_WSBEiJ_G0026473
protein coding gene Chr3:55864481-55902935 (-)



Homology
more
  • Human Ortholog
    ANKUB1, ankyrin repeat and ubiquitin domain containing 1
  • Vertebrate Orthologs
    8
  • Human Ortholog
    ANKUB1, ankyrin repeat and ubiquitin domain containing 1
    Orthology source: HomoloGene, HGNC
  • Synonyms
    C3orf16
  • Links
    NCBI Gene ID: 389161
    neXtProt AC: NX_A6NFN9
    UniProt: A6NFN9

  • Chr Location
    3q25.1; chr3:149760648-149792823 (-)  GRCh38.p7

Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    7 phenotype references
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • cDNA Data
Interactions
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Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic 242037 NCBI Gene Model | MGI Sequence Detail 25116 C57BL/6J ±  kb
transcript NM_001033349 RefSeq | MGI Sequence Detail 1759 C57BL/6  
polypeptide Q3UUE9 UniProt | EBI | MGI Sequence Detail 192 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 3
    cDNA 3

    Microarray probesets 2
References
more
  • Summaries
    All 23
    Diseases 1
    Phenotypes 7
  • Earliest
    J:70677 Cook SA, et al., Mouse paracentric inversion In(3)55Rk mutates the urate oxidase gene. Cytogenet Cell Genet. 2001;93(1-2):77-82
  • Latest
    J:99680 The FANTOM Consortium and RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group), The Transcriptional Landscape of the Mammalian Genome. Science. 2005;309(5740):1559-1563

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
05/19/2020
MGI 6.15
The Jackson Laboratory