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Slc10a5 Gene Detail
Summary
  • Symbol
    Slc10a5
  • Name
    solute carrier family 10 (sodium/bile acid cotransporter family), member 5
  • Synonyms
    LOC241877
  • Feature Type
    protein coding gene
  • IDs
    MGI:2685251
    NCBI Gene: 241877
  • Alliance
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr3:10331734-10335656 bp, - strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 3, 2.62 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    104 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2685251
protein coding gene Chr3:10331734-10335656 (-)
129S1/SvImJ MGP_129S1SvImJ_G0027067
protein coding gene Chr3:7313935-7317855 (-)
A/J MGP_AJ_G0027031
protein coding gene Chr3:7463289-7467211 (-)
AKR/J MGP_AKRJ_G0027001
protein coding gene Chr3:7372271-7376193 (-)
BALB/cJ MGP_BALBcJ_G0027040
protein coding gene Chr3:7158890-7162812 (-)
C3H/HeJ MGP_C3HHeJ_G0026780
protein coding gene Chr3:7669890-7673812 (-)
C57BL/6NJ MGP_C57BL6NJ_G0027484
protein coding gene Chr3:7945827-7949749 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0024846
protein coding gene Chr3:6341248-6345178 (-)
CAST/EiJ MGP_CASTEiJ_G0026238
protein coding gene Chr3:7696827-7700748 (-)
CBA/J MGP_CBAJ_G0026758
protein coding gene Chr3:7957564-7961486 (-)
DBA/2J MGP_DBA2J_G0026894
protein coding gene Chr3:7022438-7026378 (-)
FVB/NJ MGP_FVBNJ_G0026861
protein coding gene Chr3:6956162-6960084 (-)
LP/J MGP_LPJ_G0027004
protein coding gene Chr3:7829793-7833715 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0026882
protein coding gene Chr3:8985836-8989758 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0027544
protein coding gene Chr3:7231779-7235689 (-)
PWK/PhJ MGP_PWKPhJ_G0025973
protein coding gene Chr3:7255853-7259769 (-)
SPRET/EiJ MGP_SPRETEiJ_G0025776
protein coding gene Chr3:7370312-7374240 (-)
WSB/EiJ MGP_WSBEiJ_G0026309
protein coding gene Chr3:7258924-7262874 (-)



Homology
more
  • Human Ortholog
    SLC10A5, solute carrier family 10 member 5
  • Vertebrate Orthologs
    6
  • Human Ortholog
    SLC10A5, solute carrier family 10 member 5
    Orthology source: HGNC, HomoloGene
  • Synonyms
    P5
  • Links
    NCBI Gene ID: 347051
    neXtProt AC: NX_Q5PT55
    UniProt: Q5PT55

  • Chr Location
    8q21.13; chr8:81693656-81694972 (-)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 241877 NCBI Gene Model | MGI Sequence Detail 3923 C57BL/6J ±  kb
transcript NM_001010834 RefSeq | MGI Sequence Detail 3923 C57BL/6  
polypeptide Q5PT54 UniProt | EBI | MGI Sequence Detail 434 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 6
    cDNA 5
    Primer pair 1

    Microarray probesets 1
References
more
  • Summaries
    All 17
    Developmental Gene Expression 2
    Gene Ontology 2
  • Earliest
    J:122989 Visel A, et al., GenePaint.org: an atlas of gene expression patterns in the mouse embryo. Nucleic Acids Res. 2004 Jan 1;32(Database issue):D552-6
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
12/04/2018
MGI 6.13
The Jackson Laboratory