Slc10a5
Gene Detail

Symbol Name ID

Slc10a5 solute carrier family 10 (sodium/bile acid cotransporter family), member 5 MGI:2685251

Synonyms

LOC241877

Feature Type

protein coding gene

Genetic Map

Chromosome 3

2.62 cM
Detailed Genetic Map ± 1 cM


Mapping data(1)

Sequence Map

Chr3:10331734-10335656 bp, - strand From NCBI annotation of GRCm38   3923 bp   ±  kb flank VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser

Vertebrate homology

HomoloGene:78106  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle

Protein SuperFamily: sodium-dependent transporter
Gene Tree: Slc10a5

Human homologs

Human Homolog		SLC10A5, solute carrier family 10 (sodium/bile acid cotransporter family), member 5
NCBI Gene ID		347051
neXtProt AC		NX_Q5PT55
Human Synonyms		P5
Human Chr (Location)		8q21.13; chr8:82605891-82607207 (-)  GRCh37.p10

Alleles and phenotypes

All alleles(1) : Gene trapped(1)

Gene Ontology (GO) classifications

All GO classifications: (9 annotations)

Process	ion transport, sodium ion transport, ...
Component	integral to membrane, membrane
Function	bile acid:sodium symporter activity, symporter activity

External Resources: FuncBase

Expression

Literature Summary: (2 records)
Data Summary: Results (95)    Tissues (95)    Images (1)
Theiler Stages: 22, 23

Assay Type	Results
RNA in situ	95

cDNA source data(4)
External Resources: Allen Institute   GEO   ArrayExpress

Molecular reagents

All nucleic(5) cDNA(4) Primer pair(1)
Microarray probesets(1)

Other database links

Ensembl Gene Model	ENSMUSG00000058921 (Evidence)
Entrez Gene	241877 (Evidence)
UniGene	442146
DoTS	DT.97397270
NIA Mouse Gene Index	U165223
Consensus CDS Project	CCDS17241.1
International Mouse Knockout Project Status	Slc10a5

Sequences

Length	Strain/Species
genomic	241877	NCBI Gene Model | MGI Sequence Detail	3923	C57BL/6J
transcript	NM_001010834	RefSeq | MGI Sequence Detail	3923	C57BL/6
polypeptide	Q5PT54	UniProt | EBI | MGI Sequence Detail	434	Not Applicable

All sequences(12) RefSeq(2) UniProt(1)

Polymorphisms

SNPs within 2kb(104 from dbSNP Build 137)

Protein-related information

Resource	ID	Description
InterPro	IPR002657	Bile acid:sodium symporter
Protein Ontology	PR:000014921	sodium/bile acid cotransporter 5

Graphical View of Protein Domain Structure

References

(Earliest) J:122989 Visel A, et al., GenePaint.org: an atlas of gene expression patterns in the mouse embryo. Nucleic Acids Res. 2004 Jan 1;32(Database issue):D552-6
(Latest) J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
All references(21)