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Slc10a5
Gene Detail
Symbol

Name
ID
Slc10a5
solute carrier family 10 (sodium/bile acid cotransporter family), member 5
MGI:2685251
Synonyms
LOC241877
Feature Type
protein coding gene
Genetic Map
Chromosome 3
2.62 cM
Detailed Genetic Map ± 1 cM


Mapping data(1)
Sequence Map
Chr3:10331734-10335656 bp, - strand
From VEGA annotation of GRCm38

  3923 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:78106  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle

HCOP human homology predictions: SLC10A5
Protein SuperFamily: sodium-dependent transporter
Gene Tree: Slc10a5

Human
homologs
SLC10A5, solute carrier family 10, member 5
Orthology source: HomoloGene

IDs:
NCBI Gene ID: 347051
neXtProt AC: NX_Q5PT55

Human Synonyms: P5

Human Chr (Location): 8q21.13; chr8:81693656-81694972 (-)  GRCh38.p2

Mutations,
alleles, and
phenotypes
Incidental mutations (data from Mutagenetix , APF )
Interactions
Slc10a5 interacts with 347 markers (Mir1a-1, Mir1a-2, Mir1b, ...)
Gene Ontology
(GO)
classifications
Expression
Literature Summary: (2 records)
Data Summary: Results (95)    Tissues (95)    Images (1)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 95
cDNA source data(4)
Other mouse links: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(5) cDNA(4) Primer pair(1)
Microarray probesets(1)
Other database
links
VEGA Gene Model OTTMUSG00000051492 (Evidence)
Ensembl Gene Model ENSMUSG00000058921 (Evidence)
Entrez Gene 241877 (Evidence)
UniGene 442146
DoTS DT.97397270
NIA Mouse Gene Index U165223
Consensus CDS Project CCDS17241.1
International Mouse Phenotyping Consortium Status Slc10a5
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000051492 VEGA Gene Model | MGI Sequence Detail 3923 C57BL/6J ±  kb
transcript OTTMUST00000130087 VEGA | MGI Sequence Detail 3923 Not Applicable 
polypeptide OTTMUSP00000069790 VEGA | MGI Sequence Detail 434 Not Applicable 

For the selected sequences
All sequences(15) RefSeq(2) UniProt(1)
Polymorphisms
SNPs within 2kb(104 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3
InterPro IPR030209 Solute carrier family 10 member 5
Protein Ontology PR:000014921 sodium/bile acid cotransporter 5
References
(Earliest) J:122989 Visel A, et al., GenePaint.org: an atlas of gene expression patterns in the mouse embryo. Nucleic Acids Res. 2004 Jan 1;32(Database issue):D552-6
(Latest) J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
All references(20)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
08/25/2015
MGI 6.0
The Jackson Laboratory