Samd15 MGI Mouse Gene Detail - MGI:2685109 - sterile alpha motif domain containing 15

Sequence Map

Chr12:87247240-87260315 bp, + strand
From NCBI annotation of GRCm39
View this region in JBrowse
Genome Browsers

Ensembl | UCSC | NCBI

For selected strains:

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_2685109	protein coding gene	Chr12:87246497-87260315 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0019981	protein coding gene	Chr12:88096247-88111399 (+)
A/J	MGP_AJ_G0019939	protein coding gene	Chr12:84750042-84763796 (+)
AKR/J	MGP_AKRJ_G0019914	protein coding gene	Chr12:87048992-87062715 (+)
BALB/cJ	MGP_BALBcJ_G0019918	protein coding gene	Chr12:85083038-85097101 (+)
C3H/HeJ	MGP_C3HHeJ_G0019724	protein coding gene	Chr12:87537572-87557623 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0020370	protein coding gene	Chr12:90629797-90648816 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0017988	protein coding gene	Chr12:81628178-81640246 (+)
CAST/EiJ	MGP_CASTEiJ_G0019274	protein coding gene	Chr12:82563253-82576881 (+)
CBA/J	MGP_CBAJ_G0019696	protein coding gene	Chr12:94112326-94127145 (+)
DBA/2J	MGP_DBA2J_G0019809	protein coding gene	Chr12:84244861-84258833 (+)
FVB/NJ	MGP_FVBNJ_G0019796	protein coding gene	Chr12:83238081-83252573 (+)
LP/J	MGP_LPJ_G0019883	protein coding gene	Chr12:87977478-87991961 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0019835	protein coding gene	Chr12:96872919-96887424 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0020402	protein coding gene	Chr12:86678758-86694987 (+)
PWK/PhJ	MGP_PWKPhJ_G0019038	protein coding gene	Chr12:78797285-78811512 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0018833	protein coding gene	Chr12:81181372-81198752 (+)
WSB/EiJ	MGP_WSBEiJ_G0019327	protein coding gene	Chr12:87454422-87469094 (+)

Vertebrate Orthology Source

Alliance of Genome Resources

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Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.

Biological Process

Cellular Component

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Expression Overview

GXD's primary emphasis is on endogenous gene expression during development. Click on grid cells to view annotations.

Blue cells = expressed in wild-type.
Gray triangles = other expression annotations only
(e.g. absence of expression or data from mutants).

early conceptus	embryo ectoderm	embryo endoderm	embryo mesoderm	embryo mesenchyme	extraembryonic component	alimentary system	auditory system	branchial arches	cardiovascular system	connective tissue	endocrine system	exocrine system	hemolymphoid system	integumental system	limbs	liver and biliary system	musculoskeletal system	nervous system	olfactory system	reproductive system	respiratory system	urinary system	visual system

Click cells to view annotations.

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			Length	Strain/Species	Flank
genomic	238333	NCBI Gene Model \| MGI Sequence Detail	13076	C57BL/6J	± kb
transcript	NM_001290288	RefSeq \| MGI Sequence Detail	2063	C57BL/6
polypeptide	F6XZJ7	UniProt \| EBI \| MGI Sequence Detail	620	Not Applicable

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UniProt

2 Sequences
Protein Ontology

PR:000030686 sterile alpha motif domain-containing protein 15

(term hierarchy)
InterPro Domains

IPR001660 Sterile alpha motif domain

IPR013761 Sterile alpha motif/pointed domain superfamily

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Summaries

All 18

Phenotypes 5
Earliest

J:86696 Zambrowicz BP, et al., Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Proc Natl Acad Sci U S A. 2003 Nov 25;100(24):14109-14
Latest

J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582

TSS for Samd15:

(View these features in JBrowse)

Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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