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Taar5
Gene Detail
Symbol

Name
ID
Taar5
trace amine-associated receptor 5
MGI:2685073
Synonyms
LOC215854
Feature Type
protein coding gene
Genetic Map
Chromosome 10
11.40 cM
Detailed Genetic Map ± 1 cM


Mapping data(1)
Sequence Map
Chr10:23970706-23971719 bp, + strand
From VEGA annotation of GRCm38

  1014 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:20850  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken

HCOP human homology predictions: TAAR5
Protein SuperFamily: trace amine-associated receptor
Gene Tree: Taar5

Human
homologs
TAAR5, trace amine associated receptor 5
Orthology source: HomoloGene

IDs:
NCBI Gene ID: 9038
neXtProt AC: NX_O14804

Human Synonyms: PNR

Human Chr (Location): 6q23; chr6:132588592-132589738 (-)  GRCh38.p2

Mutations,
alleles, and
phenotypes
All mutations/alleles(6) : Targeted(6)
Genomic Mutations involving Taar5 (2)
Incidental mutations (data from Mutagenetix , APF )
 
Mice homozygous for a knock-out allele exhibit abnormal olfactory system physiology.
 
Interactions
Taar5 interacts with 14 markers (Mir24-1, Mir24-2, Mir31, ...)
Gene Ontology
(GO)
classifications
Expression
Literature Summary: (2 records)
Data Summary: Results (20)    Tissues (6)    Images (8)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 18
RT-PCR 2
cDNA source data(4)
Other mouse links: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(6) cDNA(4) Primer pair(1) Other(1)
Microarray probesets(1)
Other database
links
VEGA Gene Model OTTMUSG00000019210 (Evidence)
Ensembl Gene Model ENSMUSG00000069706 (Evidence)
Entrez Gene 215854 (Evidence)
UniGene 377236
Consensus CDS Project CCDS23738.1
International Mouse Phenotyping Consortium Status Taar5
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000019210 VEGA Gene Model | MGI Sequence Detail 1014 C57BL/6J ±  kb
transcript OTTMUST00000046017 VEGA | MGI Sequence Detail 1014 Not Applicable 
polypeptide OTTMUSP00000020758 VEGA | MGI Sequence Detail 337 Not Applicable 

For the selected sequences
All sequences(14) RefSeq(2) UniProt(2)
Polymorphisms
SNPs within 2kb(17 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR017981 GPCR, family 2-like
InterPro IPR017452 GPCR, rhodopsin-like, 7TM
InterPro IPR000276 G protein-coupled receptor, rhodopsin-like
InterPro IPR009132 Trace amine receptor
Protein Ontology PR:000001679 trace amine-associated receptor 5
References
(Earliest) J:95733 Lindemann L, et al., Trace amine-associated receptors form structurally and functionally distinct subfamilies of novel G protein-coupled receptors. Genomics. 2005 Mar;85(3):372-85
(Latest) J:221172 Yoon KH, et al., Olfactory receptor genes expressed in distinct lineages are sequestered in different nuclear compartments. Proc Natl Acad Sci U S A. 2015 May 5;112(18):E2403-9
All references(28)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
08/18/2015
MGI 6.0
The Jackson Laboratory