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Taar5
Gene Detail
 Symbol
Name
ID
Taar5
trace amine-associated receptor 5
MGI:2685073
Synonyms LOC215854
Feature Type protein coding gene
Genetic Map
Chromosome 10
11.40 cM
Detailed Genetic Map ± 1 cM


Mapping data(1)
Sequence Map
Chr10:23970706-23971719 bp, + strand
From VEGA annotation of GRCm38

  1014 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:20850  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken

Protein SuperFamily: trace amine-associated receptor
Gene Tree: Taar5

Human
homologs
Human Homolog TAAR5, trace amine associated receptor 5
NCBI Gene ID 9038
neXtProt AC  NX_O14804
Human Synonyms  PNR
Human Chr (Location)  6q23; chr6:132588592-132589738 (-)  GRCh38
Alleles
and
phenotypes
All alleles(4) : Targeted(4)
Incidental mutations (data from Mutagenetix , APF )
 
Mice homozygous for a knock-out allele exhibit abnormal olfactory system physiology.
 
Gene Ontology
(GO)
classifications
All GO classifications: (21 annotations)
Process behavior, cell surface receptor signaling pathway, ...
Component integral component of membrane, integral component of plasma membrane, ...
Function G-protein coupled amine receptor activity, G-protein coupled receptor activity, ...
External Resources: FuncBase
Expression
Literature Summary: (2 records)
Data Summary: Results (20)    Tissues (5)    Images (8)
Theiler Stages: 23, 25, 28
Assay TypeResults
RNA in situ 18
RT-PCR 2
cDNA source data(4)
External Resources: Allen Institute   GEO   ArrayExpress
Molecular
reagents
All nucleic(6) cDNA(4) Primer pair(1) Other(1)
Microarray probesets(1)
Other database
links
VEGA Gene ModelOTTMUSG00000019210 (Evidence)
Ensembl Gene ModelENSMUSG00000069706 (Evidence)
Entrez Gene215854 (Evidence)
UniGene377236
Consensus CDS ProjectCCDS23738.1
International Mouse Knockout Project StatusTaar5
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000019210 VEGA Gene Model | MGI Sequence Detail 1014 C57BL/6J ±  kb
transcript OTTMUST00000046017 VEGA | MGI Sequence Detail 1014 Not Applicable 
polypeptide OTTMUSP00000020758 VEGA | MGI Sequence Detail 337 Not Applicable 

For the selected sequences
All sequences(14) RefSeq(2) UniProt(2)
Polymorphisms SNPs within 2kb(17 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR017981 GPCR, family 2-like
InterPro IPR017452 GPCR, rhodopsin-like, 7TM
InterPro IPR000276 G protein-coupled receptor, rhodopsin-like
InterPro IPR009132 Trace amine receptor
Protein Ontology PR:000001679 trace amine-associated receptor 5
References (Earliest) J:95733 Lindemann L, et al., Trace amine-associated receptors form structurally and functionally distinct subfamilies of novel G protein-coupled receptors. Genomics. 2005 Mar;85(3):372-85
(Latest) J:197486 Li Q, et al., Synchronous evolution of an odor biosynthesis pathway and behavioral response. Curr Biol. 2013 Jan 7;23(1):11-20
All references(28)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
07/15/2014
MGI 5.18
The Jackson Laboratory