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Taar4
Gene Detail
Symbol

Name
ID
Taar4
trace amine-associated receptor 4
MGI:2685072
Feature Type
protein coding gene
Genetic Map
Chromosome 10
11.40 cM
Detailed Genetic Map ± 1 cM


Mapping data(1)
Sequence Map
Chr10:23960494-23961537 bp, + strand
From VEGA annotation of GRCm38

  1044 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:45509  Vertebrate Homology Class
1 mouse; 1 rat; 1 rhesus macaque; 1 cattle; 1 dog; 4 western clawed frog; 5 zebrafish

HCOP human homology predictions: TAAR4P
Protein SuperFamily: trace amine-associated receptor
Gene Tree: Taar4

Human
homologs
TAAR4P, trace amine associated receptor 4, pseudogene
Orthology source: HGNC

IDs:
NCBI Gene ID: 503612

Human Chr (Location): 6q23.2; chr6:132594389-132595439 (-)  GRCh38.p2

Mutations,
alleles, and
phenotypes
All mutations/alleles(9) : Targeted(9)
Genomic Mutations involving Taar4 (2)
Incidental mutations (data from Mutagenetix , APF , CvDC )
 
Mice homozygous for a knock-out allele exhibit impaired olfactory response and aversion to PEA and puma urine.
 
Gene Ontology
(GO)
classifications
Expression
Literature Summary: (1 records)
Data Summary: Results (7)    Tissues (4)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 5
RT-PCR 2
cDNA source data(5)
Other mouse links: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(7) cDNA(5) Primer pair(1) Other(1)
Microarray probesets(1)
Other database
links
VEGA Gene Model OTTMUSG00000019215 (Evidence)
Ensembl Gene Model ENSMUSG00000069707 (Evidence)
Entrez Gene 209513 (Evidence)
UniGene 300612
DFCI TC1698159
DoTS DT.101239349
Consensus CDS Project CCDS23737.1
International Mouse Phenotyping Consortium Status Taar4
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000019215 VEGA Gene Model | MGI Sequence Detail 1044 C57BL/6J ±  kb
transcript OTTMUST00000046022 VEGA | MGI Sequence Detail 1044 Not Applicable 
polypeptide OTTMUSP00000020762 VEGA | MGI Sequence Detail 347 Not Applicable 

For the selected sequences
All sequences(20) RefSeq(2) UniProt(4)
Polymorphisms
SNPs within 2kb(36 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR017452 GPCR, rhodopsin-like, 7TM
InterPro IPR000276 G protein-coupled receptor, rhodopsin-like
InterPro IPR009132 Trace amine receptor
Protein Ontology PR:000001714 trace amine-associated receptor 4
References
(Earliest) J:83410 Vassilatis DK, et al., The G protein-coupled receptor repertoires of human and mouse. Proc Natl Acad Sci U S A. 2003 Apr 15;100(8):4903-8
(Latest) J:197678 Dewan A, et al., Non-redundant coding of aversive odours in the main olfactory pathway. Nature. 2013 May 23;497(7450):486-9
All references(28)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
07/28/2015
MGI 5.22
The Jackson Laboratory