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Taar4 Gene Detail
Summary
  • Symbol
    Taar4
  • Name
    trace amine-associated receptor 4
  • Feature Type
    protein coding gene
  • IDs
    MGI:2685072
    NCBI Gene: 209513
Location & Maps
more
  • Sequence Map
    Chr10:23960494-23961537 bp, + strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      1044 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 10, 11.40 cM
  • Mapping Data
    1 experiment
Homology
more
  • Human Ortholog
    TAAR4P, trace amine associated receptor 4, pseudogene
  • Vertebrate Orthologs
    14
  • Human Ortholog
    TAAR4P, trace amine associated receptor 4, pseudogene
    Orthology source: HGNC
  • Links
    NCBI Gene ID: 503612

  • Chr Location
    6q23.2; chr6:132594389-132595439 (-)  GRCh38.p2

Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    2 phenotypes from 1 allele in 1 genetic background
    10 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
  • All Mutations and Alleles
    10
  • Chemically induced (other)
    1
  • Targeted
    9
  • Genomic Mutations
    3 involving Taar4
  • Incidental Mutations
Mice homozygous for a knock-out allele exhibit impaired olfactory response and aversion to PEA and puma urine.
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000019215 VEGA Gene Model | MGI Sequence Detail 1044 C57BL/6J ±  kb
transcript OTTMUST00000046022 VEGA | MGI Sequence Detail 1044 Not Applicable  
polypeptide OTTMUSP00000020762 VEGA | MGI Sequence Detail 347 Not Applicable  
For the selected sequence
Polymorphisms
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  • SNPs within 2kb
    36 from dbSNP Build 142
Protein
Information
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  • UniProt
    4 Sequences
  • Protein Ontology
    PR:000001714 trace amine-associated receptor 4
  • InterPro Domains
    IPR017452 GPCR, rhodopsin-like, 7TM
    IPR000276 G protein-coupled receptor, rhodopsin-like
    IPR009132 Trace amine associated receptor family
Molecular
Reagents
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  • All nucleic 7
    cDNA 5
    Primer pair 1
    Other 1

    Microarray probesets 1
References
more
  • Summaries
    All 26
    Developmental Gene Expression 1
    Gene Ontology 8
    Phenotypes 10
  • Earliest
    J:83410 Vassilatis DK, et al., The G protein-coupled receptor repertoires of human and mouse. Proc Natl Acad Sci U S A. 2003 Apr 15;100(8):4903-8
  • Latest
    J:197678 Dewan A, et al., Non-redundant coding of aversive odours in the main olfactory pathway. Nature. 2013 May 23;497(7450):486-9

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
09/13/2016
MGI 6.05
The Jackson Laboratory