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Ccdc170 Gene Detail
Summary
  • Symbol
    Ccdc170
  • Name
    coiled-coil domain containing 170
  • Synonyms
    Gm221, LOC237250
  • Feature Type
    protein coding gene
  • IDs
    MGI:2685067
    NCBI Gene: 100504234
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr10:4482502-4562231 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 10, 2.06 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    497 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2685067
protein coding gene Chr10:4481416-4562374 (+)
129S1/SvImJ MGP_129S1SvImJ_G0016980
protein coding gene Chr10:1484179-1581461 (+)
A/J MGP_AJ_G0016958
protein coding gene Chr10:1403386-1492481 (+)
AKR/J MGP_AKRJ_G0016923
protein coding gene Chr10:1396052-1487523 (+)
BALB/cJ MGP_BALBcJ_G0016916
protein coding gene Chr10:1373501-1456356 (+)
C3H/HeJ MGP_C3HHeJ_G0016741
protein coding gene Chr10:1496078-1580787 (+)
C57BL/6NJ MGP_C57BL6NJ_G0017379
protein coding gene Chr10:1526509-1614386 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0015085
protein coding gene Chr10:1228613-1308958 (+)
CAST/EiJ MGP_CASTEiJ_G0016323
protein coding gene Chr10:1542403-1630150 (+)
CBA/J MGP_CBAJ_G0016713
protein coding gene Chr10:1574847-1665129 (+)
DBA/2J MGP_DBA2J_G0016821
protein coding gene Chr10:1408179-1487555 (+)
FVB/NJ MGP_FVBNJ_G0016816
protein coding gene Chr10:1371459-1450829 (+)
LP/J MGP_LPJ_G0016896
protein coding gene Chr10:1475290-1556539 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0016847
protein coding gene Chr10:1464925-1560617 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0017416
protein coding gene Chr10:1417665-1509605 (+)
PWK/PhJ MGP_PWKPhJ_G0016109
protein coding gene Chr10:1407661-1491849 (+)
SPRET/EiJ MGP_SPRETEiJ_G0015890
protein coding gene Chr10:1607732-1693257 (+)
WSB/EiJ MGP_WSBEiJ_G0016384
protein coding gene Chr10:1481004-1572571 (+)



Homology
more
  • Human Ortholog
    CCDC170, coiled-coil domain containing 170
  • Vertebrate Orthologs
    10
  • Human Ortholog
    CCDC170, coiled-coil domain containing 170
    Orthology source: HomoloGene, HGNC
  • Synonyms
    bA282P11.1, C6orf97
  • Links
    NCBI Gene ID: 80129
    neXtProt AC: NX_Q8IYT3
    UniProt: Q8IYT3

  • Chr Location
    6q25.1; chr6:151494040-151621193 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    6 phenotype references
Gene Ontology
(GO)
Classifications
less
Expression
less
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000019767 Ensembl Gene Model | MGI Sequence Detail 79730 C57BL/6J ±  kb
transcript ENSMUST00000138112 Ensembl | MGI Sequence Detail 3350 Not Applicable  
polypeptide ENSMUSP00000115997 Ensembl | MGI Sequence Detail 722 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    3 Sequences
  • InterPro Domains
    IPR039139 Coiled-coil domain-containing protein 170-like
Molecular
Reagents
less

  • Microarray probesets 1
References
more
  • Summaries
    All 15
    Phenotypes 6
  • Earliest
    J:86696 Zambrowicz BP, et al., Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Proc Natl Acad Sci U S A. 2003 Nov 25;100(24):14109-14
  • Latest
    J:142754 Hansen GM, et al., Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Genome Res. 2008 Oct;18(10):1670-9

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
02/12/2019
MGI 6.13
The Jackson Laboratory