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Slc30a10
Gene Detail
 Symbol
Name
ID
Slc30a10
solute carrier family 30, member 10
MGI:2685058
Synonyms E130106K10Rik
Feature Type protein coding gene
Genetic Map
Chromosome 1
89.53 cM
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr1:185454848-185468762 bp, + strand
From NCBI annotation of GRCm38

  13915 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:100946  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 chicken; 1 western clawed frog; 1 zebrafish

Protein SuperFamily: cation efflux protein
Gene Tree: Slc30a10

Human
homologs
Human Homolog SLC30A10, solute carrier family 30, member 10
NCBI Gene ID 55532
neXtProt AC  NX_Q6XR72
Human Synonyms  HMDPC, ZnT-10, ZNT10, ZNT8, ZRC1
Human Chr (Location)  1q41; chr1:219913919-219958910 (-)  GRCh38
Disease Associations  (1) Diseases Associated with Human SLC30A10
Mutations,
alleles, and
phenotypes
All mutations/alleles(2) : Targeted(2)
Incidental mutations (data from Mutagenetix , APF )
Interactions
Slc30a10 interacts with 388 markers (Mir7-1, Mir7-2, Mir7b, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (10 annotations)
Process cation transport, ion transport, ...
Component integral component of membrane, membrane, ...
Function cation transmembrane transporter activity
External Resources: FuncBase
Expression
Literature Summary: (1 records)
Data Summary: Results (29)    Tissues (29)    Images (8)
Theiler Stages: 19, 23, 28
Assay TypeResults
RNA in situ 29
cDNA source data(25)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(27) cDNA(25) Primer pair(1) Other(1)
Microarray probesets(4)
Other database
links
Ensembl Gene ModelENSMUSG00000026614 (Evidence)
Entrez Gene226781 (Evidence)
UniGene227117
DFCITC1597452, TC1648244, TC1650588
NIA Mouse Gene IndexU001247
Consensus CDS ProjectCCDS15599.1
International Mouse Knockout Project StatusSlc30a10
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic 226781 NCBI Gene Model | MGI Sequence Detail 13915 C57BL/6J ±  kb
transcript NM_001033286 RefSeq | MGI Sequence Detail 5836 C57BL/6 
polypeptide Q3UVU3 UniProt | EBI | MGI Sequence Detail 470 Not Applicable 

For the selected sequences
All sequences(24) RefSeq(3) UniProt(1)
Polymorphisms SNPs within 2kb(214 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR002524 Cation efflux protein
InterPro IPR027469 Cation efflux protein transmembrane domain
Protein Ontology PR:000015074 zinc transporter 10
Graphical View of Protein Domain Structure
References (Earliest) J:122989 Visel A, et al., GenePaint.org: an atlas of gene expression patterns in the mouse embryo. Nucleic Acids Res. 2004 Jan 1;32(Database issue):D552-6
(Latest) J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
All references(27)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
08/26/2014
MGI 5.19
The Jackson Laboratory