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Asphd1 Gene Detail
Summary
  • Symbol
    Asphd1
  • Name
    aspartate beta-hydroxylase domain containing 1
  • Synonyms
    A830007L07Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:2685014
    NCBI Gene: 233879
Location & Maps
more
  • Sequence Map
    Chr7:126945567-126949582 bp, - strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      4016 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 7, 69.25 cM
  • Mapping Data
    1 experiment
Homology
more
  • Human Ortholog
    ASPHD1, aspartate beta-hydroxylase domain containing 1
  • Human Ortholog
    ASPHD1, aspartate beta-hydroxylase domain containing 1
    Orthology source: HGNC
  • Links
    NCBI Gene ID: 253982
    neXtProt AC: NX_Q5U4P2

  • Chr Location
    16p11.2; chr16:29900826-29920112 (+)  GRCh38.p2

Human Diseases
less
  • References
    6 with disease annotations
Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    10 phenotype references
  • All Mutations and Alleles
    6
  • Targeted
    6
  • Genomic Mutations
    3 involving Asphd1
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000023163 VEGA Gene Model | MGI Sequence Detail 4016 C57BL/6J ±  kb
transcript OTTMUST00000056005 VEGA | MGI Sequence Detail 1647 Not Applicable  
polypeptide OTTMUSP00000026873 VEGA | MGI Sequence Detail 360 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    40 from dbSNP Build 142
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 7
    cDNA 7

    Microarray probesets 2
References
more
  • Summaries
    All 23
    Diseases 6
    Gene Ontology 2
    Phenotypes 10
  • Earliest
    J:99680 The FANTOM Consortium and RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group), The Transcriptional Landscape of the Mammalian Genome. Science. 2005;309(5740):1559-1563
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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Funding Information
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last database update
11/29/2016
MGI 6.06
The Jackson Laboratory