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Cog7 Gene Detail
Summary
  • Symbol
    Cog7
  • Name
    component of oligomeric golgi complex 7
  • Synonyms
    5630400E24Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:2685013
    NCBI Gene: 233824
  • Gene Overview
    MyGene.info: COG7
  • Alliance
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr7:121922836-121981706 bp, - strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 7, 65.09 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    458 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2685013
protein coding gene Chr7:121879363-121981711 (-)
129S1/SvImJ MGP_129S1SvImJ_G0032946
protein coding gene Chr7:125927583-126038856 (-)
A/J MGP_AJ_G0032929
protein coding gene Chr7:122668196-122774807 (-)
AKR/J MGP_AKRJ_G0032861
protein coding gene Chr7:125792426-125896784 (-)
BALB/cJ MGP_BALBcJ_G0032934
protein coding gene Chr7:122365290-122467739 (-)
C3H/HeJ MGP_C3HHeJ_G0032644
protein coding gene Chr7:125717604-125826144 (-)
C57BL/6NJ MGP_C57BL6NJ_G0033440
protein coding gene Chr7:130907465-131023928 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0030412
protein coding gene Chr7:123997054-124101300 (-)
CAST/EiJ MGP_CASTEiJ_G0031972
protein coding gene Chr7:117485218-117596330 (-)
CBA/J MGP_CBAJ_G0032617
protein coding gene Chr7:135275023-135402056 (-)
DBA/2J MGP_DBA2J_G0032769
protein coding gene Chr7:120681021-120782707 (-)
FVB/NJ MGP_FVBNJ_G0032722
protein coding gene Chr7:120530547-120633442 (-)
LP/J MGP_LPJ_G0032863
protein coding gene Chr7:127380079-127491002 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0032754
protein coding gene Chr7:136691190-136798968 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0033460
protein coding gene Chr7:124797633-124903099 (-)
PWK/PhJ MGP_PWKPhJ_G0031680
protein coding gene Chr7:113605816-113710069 (-)
SPRET/EiJ MGP_SPRETEiJ_G0031526
protein coding gene Chr7:111563261-111673235 (-)
WSB/EiJ MGP_WSBEiJ_G0032085
protein coding gene Chr7:125706256-125811233 (-)



Homology
more
  • Human Ortholog
    COG7, component of oligomeric golgi complex 7
  • Vertebrate Orthologs
    10
  • Human Ortholog
    COG7, component of oligomeric golgi complex 7
    Orthology source: HomoloGene, HGNC
  • Synonyms
    CDG2E
  • Links
    NCBI Gene ID: 91949
    neXtProt AC: NX_P83436
    UniProt: P83436

  • Chr Location
    16p12.2; chr16:23388493-23453215 (-)  GRCh38.p7

  • HomoloGene
    Vertebrate Homology Class 33431
    1 human;1 mouse;1 rat;1 chimpanzee;1 cattle;1 dog;1 chicken;1 zebrafish;1 frog, western clawed;1 macaque, rhesus
  • HCOP
    human homology predictions: COG7
  • Gene Tree
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    7 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 233824 NCBI Gene Model | MGI Sequence Detail 58871 C57BL/6J ±  kb
transcript NM_001033318 RefSeq | MGI Sequence Detail 2884 NOD  
polypeptide Q3UM29 UniProt | EBI | MGI Sequence Detail 770 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    3 Sequences
  • InterPro Domains
    IPR019335 Conserved oligomeric Golgi complex subunit 7
Molecular
Reagents
less
  • All nucleic 15
    cDNA 15

    Microarray probesets 1
References
more
  • Summaries
    All 25
    Gene Ontology 5
    Phenotypes 7
  • Earliest
    J:91812 Stryke D, et al., BayGenomics: a resource of insertional mutations in mouse embryonic stem cells. Nucleic Acids Res. 2003 Jan 1;31(1):278-81
  • Latest
    J:265628 Gaudet P, et al., Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief Bioinform. 2011 Sep;12(5):449-62

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/13/2018
MGI 6.13
The Jackson Laboratory