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Cog7
Gene Detail
Symbol

Name
ID
Cog7
component of oligomeric golgi complex 7
MGI:2685013
Synonyms
5630400E24Rik
Feature Type
protein coding gene
Genetic Map
Chromosome 7
65.09 cM
Detailed Genetic Map ± 1 cM


Mapping data(1)
Sequence Map
Chr7:121922839-121981711 bp, - strand
From VEGA annotation of GRCm38

  58873 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:33431  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 1 zebrafish

HCOP human homology predictions: COG7
Gene Tree: Cog7

Human
homologs
COG7, component of oligomeric golgi complex 7
Orthology source: HomoloGene, HGNC

IDs:
NCBI Gene ID: 91949
neXtProt AC: NX_P83436

Human Synonyms: CDG2E

Human Chr (Location): 16p12.2; chr16:23388493-23453210 (-)  GRCh38.p2

Disease Associations: (1) Diseases Associated with Human COG7

Mutations,
alleles, and
phenotypes
All mutations/alleles(7) : Gene trapped(3) Targeted(4)
Incidental mutations (data from Mutagenetix , APF , CvDC )
Interactions
Cog7 interacts with 82 markers (Mir1b, Mir10a, Mir10b, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (15 annotations)
Process intracellular protein transport, protein glycosylation, ...
Component Golgi apparatus, Golgi transport complex, ...
Function molecular_function
This is a GO Consortium Reference Genome Project gene.
External Resources: FuncBase
Expression
cDNA source data(14)
Other mouse links: Allen Institute   GEO   Expression Atlas
Other vertebrate links: Xenbase cog7    NEW 
Molecular
reagents
All nucleic(14) cDNA(14)
Microarray probesets(1)
Other database
links
VEGA Gene Model OTTMUSG00000026116 (Evidence)
Ensembl Gene Model ENSMUSG00000034951 (Evidence)
Entrez Gene 233824 (Evidence)
UniGene 442015
DFCI TC1582749
DoTS DT.97405643, DT.101228748, DT.101343871, DT.97358672, DT.55269520
NIA Mouse Gene Index U029208
Consensus CDS Project CCDS21805.1
International Mouse Phenotyping Consortium Status Cog7
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000026116 VEGA Gene Model | MGI Sequence Detail 58873 C57BL/6J ±  kb
transcript OTTMUST00000064493 VEGA | MGI Sequence Detail 2902 Not Applicable 
polypeptide OTTMUSP00000032034 VEGA | MGI Sequence Detail 770 Not Applicable 

For the selected sequences
All sequences(33) RefSeq(6) UniProt(2)
Polymorphisms
SNPs within 2kb(462 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR019335 Conserved oligomeric Golgi complex subunit 7
Protein Ontology PR:000005690 conserved oligomeric Golgi complex subunit 7
References
(Earliest) J:91812 Stryke D, et al., BayGenomics: a resource of insertional mutations in mouse embryonic stem cells. Nucleic Acids Res. 2003 Jan 1;31(1):278-81
(Latest) J:161922 Tang T, et al., A mouse knockout library for secreted and transmembrane proteins. Nat Biotechnol. 2010 Jul;28(7):749-55
All references(26)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
06/23/2015
MGI 5.22
The Jackson Laboratory