About   Help   FAQ
Klrh1 Gene Detail
Summary
  • Symbol
    Klrh1
  • Name
    killer cell lectin-like receptor subfamily H, member 1
  • Synonyms
    Gm156, LOC232415
  • Feature Type
    protein coding gene
  • IDs
    MGI:2685002
    NCBI Gene: 232415
  • Alliance
Location &
Maps
more
  • Sequence Map
    Chr6:129766568-129784270 bp, - strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 6, 63.44 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    385 from dbSNP Build 142
  • Strain Annotations
    17
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2685002
protein coding gene Chr6:129766568-129784270 (-)
129S1/SvImJ MGP_129S1SvImJ_G0031360
protein coding gene Chr6:133444805-133461616 (-)
A/J MGP_AJ_G0031331
protein coding gene Chr6:128330919-128361437 (-)
AKR/J MGP_AKRJ_G0031259
protein coding gene Chr6:131842433-131859387 (-)
BALB/cJ MGP_BALBcJ_G0031338
protein coding gene Chr6:127986417-128008096 (-)
C3H/HeJ MGP_C3HHeJ_G0031061
protein coding gene Chr6:132037576-132073414 (-)
C57BL/6NJ MGP_C57BL6NJ_G0031797
protein coding gene Chr6:137019148-137051674 (-)
CAROLI/EiJ no annotation
CAST/EiJ MGP_CASTEiJ_G0030440
protein coding gene Chr6:132300657-132314412 (-)
CBA/J MGP_CBAJ_G0031022
protein coding gene Chr6:142335402-142352214 (-)
DBA/2J MGP_DBA2J_G0031179
protein coding gene Chr6:127290978-127305326 (-)
FVB/NJ MGP_FVBNJ_G0031129
protein coding gene Chr6:126173166-126187774 (-)
LP/J MGP_LPJ_G0031259
protein coding gene Chr6:133654325-133672657 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0031167
protein coding gene Chr6:146226365-146240118 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0031830
protein coding gene Chr6:131914075-131928830 (-)
PWK/PhJ MGP_PWKPhJ_G0030158
protein coding gene Chr6:125579602-125595731 (-)
SPRET/EiJ MGP_SPRETEiJ_G0029987
protein coding gene Chr6:129925442-129936502 (-)
WSB/EiJ MGP_WSBEiJ_G0030528
protein coding gene Chr6:132365925-132378501 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 232415 NCBI Gene Model | MGI Sequence Detail 17703 C57BL/6J ±  kb
transcript NM_001356340 RefSeq | MGI Sequence Detail 2000 C57BL/6  
polypeptide NP_001014997 RefSeq | MGI Sequence Detail 223 C57BL/6  
For the selected sequence
Protein
Information
less
  • UniProt
    2 Sequences
  • InterPro Domains
    IPR016187 C-type lectin fold
    IPR001304 C-type lectin-like
    IPR016186 C-type lectin-like/link domain superfamily
    IPR033992 Natural killer cell receptor-like, C-type lectin-like domain
Molecular
Reagents
less
  • All nucleic 2
    cDNA 2

    Microarray probesets 1
References
more
  • Summaries
    All 17
    Gene Ontology 2
    Phenotypes 2
  • Earliest
    J:99680 The FANTOM Consortium and RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group), The Transcriptional Landscape of the Mammalian Genome. Science. 2005;309(5740):1559-1563
  • Latest
    J:265628 Gaudet P, et al., Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief Bioinform. 2011 Sep;12(5):449-62

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
06/30/2020
MGI 6.15
The Jackson Laboratory