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Msantd1 Gene Detail
Summary
  • Symbol
    Msantd1
  • Name
    Myb/SANT-like DNA-binding domain containing 1
  • Synonyms
    A930005I04Rik, LOC231132
  • Feature Type
    protein coding gene
  • IDs
    MGI:2684990
    NCBI Gene: 403174
Location & Maps
more
  • Sequence Map
    Chr5:34908012-34923839 bp, + strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      15828 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 5, 17.94 cM
  • Mapping Data
    2 experiments
Homology
more
  • Human Ortholog
    MSANTD1, Myb/SANT DNA binding domain containing 1
  • Vertebrate Orthologs
    9
  • Human Ortholog
    MSANTD1, Myb/SANT DNA binding domain containing 1
    Orthology source: HomoloGene, HGNC
  • Synonyms
    C4orf44
  • Links
    NCBI Gene ID: 345222
    neXtProt AC: NX_Q6ZTZ1
    UniProt: Q6ZTZ1

  • Chr Location
    4p16.3; chr4:3243728-3256615 (+)  GRCh38.p7

Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    3 phenotypes from 1 allele in 1 genetic background
    25 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
  • All Mutations and Alleles
    11
  • Chemically induced (ENU)
    1
  • Chemically induced (other)
    2
  • Radiation induced
    5
  • Spontaneous
    1
  • Targeted
    2
  • Genomic Mutations
    9 involving Msantd1
  • Incidental Mutations
    APF
  • Find Mice (IMSR)
Gene Ontology
(GO)
Classifications
less
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
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Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000055723 VEGA Gene Model | MGI Sequence Detail 15828 C57BL/6J ±  kb
transcript OTTMUST00000137876 VEGA | MGI Sequence Detail 2793 Not Applicable  
polypeptide OTTMUSP00000072551 VEGA | MGI Sequence Detail 278 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    106 from dbSNP Build 142
Protein
Information
less
  • UniProt
    4 Sequences
  • Protein Ontology
    PR:000032251 myb/SANT-like DNA-binding domain-containing protein 1
  • InterPro Domains
    IPR026095 Myb/SANT-like DNA-binding domain-containing protein
Molecular
Reagents
less
  • All nucleic 7
    cDNA 7

    Microarray probesets 3
References
more
  • Summaries
    All 45
    Developmental Gene Expression 1
    Diseases 1
    Phenotypes 25
  • Earliest
    J:5021 Batchelor AL, et al., A comparison of the mutagenic effectiveness of chronic neutron- and gamma-irradiation of mouse spermatogonia. Mutat Res. 1966 Jun;3(3):218-29
  • Latest
    J:236599 Dickinson ME, et al., High-throughput discovery of novel developmental phenotypes. Nature. 2016 Sep 14;537(7621):508-514

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
03/14/2017
MGI 6.08
The Jackson Laboratory