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Pex10
Gene Detail
Symbol

Name
ID
Pex10
peroxisomal biogenesis factor 10
MGI:2684988
Synonyms
LOC230983, peroxisome biogenesis factor 10
Feature Type
protein coding gene
Genetic Map
Chromosome 4
86.17 cM
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr4:155067016-155072433 bp, + strand
From VEGA annotation of GRCm38

  5418 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:5671  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 chicken; 1 western clawed frog; 1 zebrafish

Gene Tree: Pex10

Human
homologs
Human Homolog PEX10, peroxisomal biogenesis factor 10
NCBI Gene ID 5192
neXtProt AC  NX_O60683
Human Synonyms  NALD, PBD6A, PBD6B, RNF69
Human Chr (Location)  1p36.32; chr1:2404802-2412571 (-)  GRCh38
Disease Associations  (2) Diseases Associated with Human PEX10
Mutations,
alleles, and
phenotypes
All mutations/alleles(4) : Gene trapped(1) Targeted(3)
Incidental mutations (data from Mutagenetix , APF )
Interactions
Pex10 interacts with 67 markers (Mir19a, Mir19b-1, Mir19b-2, ...)
Gene Ontology
(GO)
classifications
Expression
Literature Summary: (1 records)
Data Summary: Results (10)    Tissues (5)    Images (3)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 10
cDNA source data(23)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(24) cDNA(24)
Microarray probesets(2)
Other database
links
VEGA Gene ModelOTTMUSG00000010596 (Evidence)
Ensembl Gene ModelENSMUSG00000029047 (Evidence)
Entrez Gene668173 (Evidence)
UniGene133114
DFCITC1602554, TC1659513, TC1661114
Consensus CDS ProjectCCDS19021.1
International Mouse Knockout Project StatusPex10
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000010596 VEGA Gene Model | MGI Sequence Detail 5418 C57BL/6J ±  kb
transcript OTTMUST00000024731 VEGA | MGI Sequence Detail 1688 Not Applicable 
polypeptide OTTMUSP00000011353 VEGA | MGI Sequence Detail 324 Not Applicable 

For the selected sequences
All sequences(33) RefSeq(2) UniProt(1)
Polymorphisms
SNPs within 2kb(57 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR025654 Peroxisome biogenesis factor 10
InterPro IPR006845 Pex, N-terminal
InterPro IPR013083 Zinc finger, RING/FYVE/PHD-type
InterPro IPR001841 Zinc finger, RING-type
InterPro IPR017907 Zinc finger, RING-type, conserved site
Protein Ontology PR:000012554 peroxisome biogenesis factor 10
References
(Earliest) J:86696 Zambrowicz BP, et al., Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Proc Natl Acad Sci U S A. 2003 Nov 25;100(24):14109-14
(Latest) J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
All references(31)
Other
accession IDs
MGI:3034175

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
10/08/2014
MGI 5.20
The Jackson Laboratory