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Cdr2l Gene Detail
Summary
  • Symbol
    Cdr2l
  • Name
    cerebellar degeneration-related protein 2-like
  • Synonyms
    D030068L24Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:2684867
    NCBI Gene: 237988
  • Alliance
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr11:115381916-115396132 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 11, 80.84 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    42 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2684867
protein coding gene Chr11:115381916-115396132 (+)
129S1/SvImJ MGP_129S1SvImJ_G0019383
protein coding gene Chr11:119402429-119416598 (+)
A/J MGP_AJ_G0019352
protein coding gene Chr11:114186688-114201999 (+)
AKR/J MGP_AKRJ_G0019322
protein coding gene Chr11:117592772-117609027 (+)
BALB/cJ MGP_BALBcJ_G0019326
protein coding gene Chr11:114602503-114616675 (+)
C3H/HeJ MGP_C3HHeJ_G0019132
protein coding gene Chr11:117944175-117960199 (+)
C57BL/6NJ MGP_C57BL6NJ_G0019776
protein coding gene Chr11:123039130-123054831 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0017399
protein coding gene Chr11:111228311-111242216 (+)
CAST/EiJ MGP_CASTEiJ_G0018687
protein coding gene Chr11:119257200-119270352 (+)
CBA/J MGP_CBAJ_G0019104
protein coding gene Chr11:127893460-127907759 (+)
DBA/2J MGP_DBA2J_G0019215
protein coding gene Chr11:113624267-113639131 (+)
FVB/NJ MGP_FVBNJ_G0019207
protein coding gene Chr11:113100387-113114592 (+)
LP/J MGP_LPJ_G0019285
protein coding gene Chr11:119782043-119800004 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0019240
protein coding gene Chr11:127069642-127086888 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0019814
protein coding gene Chr11:118250104-118264958 (+)
PWK/PhJ MGP_PWKPhJ_G0018451
protein coding gene Chr11:114905804-114921289 (+)
SPRET/EiJ MGP_SPRETEiJ_G0018244
protein coding gene Chr11:117995821-118010500 (+)
WSB/EiJ MGP_WSBEiJ_G0018739
protein coding gene Chr11:118198280-118214365 (+)



Homology
more
  • Human Ortholog
    CDR2L, cerebellar degeneration related protein 2 like
  • Vertebrate Orthologs
    10
  • Human Ortholog
    CDR2L, cerebellar degeneration related protein 2 like
    Orthology source: HomoloGene, HGNC
  • Synonyms
    HUMPPA
  • Links
    NCBI Gene ID: 30850
    neXtProt AC: NX_Q86X02
    UniProt: Q86X02

  • Chr Location
    17q25.1; chr17:74987632-75005800 (+)  GRCh38.p7

  • HomoloGene
    Vertebrate Homology Class 35390
    1 human;1 mouse;1 rat;1 chimpanzee;1 cattle;1 dog;1 chicken;1 zebrafish;1 frog, western clawed;1 macaque, rhesus
  • HCOP
    human homology predictions: CDR2L
  • Gene Tree
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype reference
Gene Ontology
(GO)
Classifications
less
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 237988 NCBI Gene Model | MGI Sequence Detail 14217 C57BL/6J ±  kb
transcript NM_001080929 RefSeq | MGI Sequence Detail 3700 C57BL/6  
polypeptide A2A6T1 UniProt | EBI | MGI Sequence Detail 465 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 15
    cDNA 15

    Microarray probesets 3
References
more
  • Summaries
    All 19
    Phenotypes 1
  • Earliest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
05/14/2019
MGI 6.14
The Jackson Laboratory