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Zc3h4 Gene Detail
Summary
  • Symbol
    Zc3h4
  • Name
    zinc finger CCCH-type containing 4
  • Synonyms
    Bwq1, Kiaa1064-hp, LOC330474, MGC:67629, mKIAA1064
  • Feature Type
    protein coding gene
  • IDs
    MGI:2682314
    NCBI Gene: 330474
  • Alliance
    gene page
Location & Maps
more
  • Sequence Map
    Chr7:16401207-16437696 bp, + strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser
  • Download
    Sequence
      36490 bp   ±  kb flank

  • Genome Browsers
    VEGA | Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 7, 9.03 cM
  • Mapping Data
    7 experiments
Homology
more
  • Human Ortholog
    ZC3H4, zinc finger CCCH-type containing 4
  • Vertebrate Orthologs
    8
  • Human Ortholog
    ZC3H4, zinc finger CCCH-type containing 4
    Orthology source: HomoloGene, HGNC
  • Synonyms
    C19orf7
  • Links
    NCBI Gene ID: 23211
    neXtProt AC: NX_Q9UPT8
    UniProt: Q9UPT8

  • Chr Location
    19q13.32; chr19:47064187-47114436 (-)  GRCh38.p7
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotypes from 1 allele in 1 genetic background
    1 phenotype from multigenic genotypes
    12 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    4
  • GO References
    3
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    13
  • Tissues
    11
  • cDNA Data
    8
  • Literature Summary
    3
  • Comparison Matrix
    Gene Expression + Phenotype
    • Interactions
    less
    Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic OTTMUSG00000060585 VEGA Gene Model | MGI Sequence Detail 36490 C57BL/6J ±  kb
    transcript OTTMUST00000148217 VEGA | MGI Sequence Detail 6039 Not Applicable  
    polypeptide OTTMUSP00000077080 VEGA | MGI Sequence Detail 1255 Not Applicable  
    For the selected sequence
    Polymorphisms
    less
    • SNPs within 2kb
      199 from dbSNP Build 142
    Protein
    Information
    less
    • UniProt
      6 Sequences
    • InterPro Domains
      IPR000571 Zinc finger, CCCH-type
      IPR036855 Zinc finger, CCCH-type superfamily
    Molecular
    Reagents
    less
    • All nucleic 11
      Genomic 2
      cDNA 9

      Microarray probesets 1
    Other
    Accession IDs
    less
    MGI:1298203, MGI:2389001, MGI:2685614
    References
    more
    • Summaries
      All 36
      Developmental Gene Expression 3
      Gene Ontology 3
      Phenotypes 12
    • Earliest
      J:48704 Suto J, et al., Genetics of obesity in KK mouse and effects of A(y) allele on quantitative regulation. Mamm Genome. 1998 Jul;9(7):506-10
    • Latest
      J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
    Citing These Resources
    Funding Information
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    Send questions and comments to User Support.     		last database update
    05/15/2018
    MGI 6.12     		The Jackson Laboratory