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Chil6 Gene Detail
Summary
  • Symbol
    Chil6
  • Name
    chitinase-like 6
  • Synonyms
    BC051070, BYm, MGC:58999
  • Feature Type
    protein coding gene
  • IDs
    MGI:2682303
    NCBI Gene: 229688
Location & Maps
more
  • Sequence Map
    Chr3:106387384-106406182 bp, - strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      18799 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 3, 46.49 cM
  • Mapping Data
    1 experiment
Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotype references
  • All Mutations and Alleles
    3
  • Chemically induced (other)
    1
  • Radiation induced
    1
  • Targeted
    1
  • Genomic Mutations
    2 involving Chil6
  • Incidental Mutations
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000052901 VEGA Gene Model | MGI Sequence Detail 18799 C57BL/6J ±  kb
transcript OTTMUST00000132405 VEGA | MGI Sequence Detail 1668 Not Applicable  
polypeptide OTTMUSP00000070596 VEGA | MGI Sequence Detail 440 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    107 from dbSNP Build 142
Protein
Information
less
  • UniProt
    1 Sequence
  • InterPro Domains
    IPR011583 Chitinase II
    IPR029070 Chitinase insertion domain
    IPR013781 Glycoside hydrolase, catalytic domain
    IPR001223 Glycoside hydrolase family 18, catalytic domain
    IPR017853 Glycoside hydrolase superfamily
Molecular
Reagents
less
  • All nucleic 1
    cDNA 1

    Microarray probesets 1
References
more
  • Summaries
    All 16
    Gene Ontology 1
    Phenotypes 5
  • Earliest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
  • Latest
    J:202092 Hussain M, et al., New paralogues and revised time line in the expansion of the vertebrate GH18 family. J Mol Evol. 2013 Apr;76(4):240-60

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
08/17/2016
MGI 6.05
The Jackson Laboratory