About   Help   FAQ
Zbtb40 Gene Detail
Summary
  • Symbol
    Zbtb40
  • Name
    zinc finger and BTB domain containing 40
  • Synonyms
    MGC:62412
  • Feature Type
    protein coding gene
  • IDs
    MGI:2682254
    NCBI Gene: 230848
  • Gene Overview
    MyGene.info: ZBTB40
Location & Maps
more
  • Sequence Map
    Chr4:136979732-137048801 bp, - strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      69070 bp   ±  kb flank

  • Genome Browsers
Homology
more
  • Human Ortholog
    ZBTB40, zinc finger and BTB domain containing 40
  • Vertebrate Orthologs
    10
  • Human Ortholog
    ZBTB40, zinc finger and BTB domain containing 40
    Orthology source: HomoloGene
  • Synonyms
    ZNF923
  • Links
    NCBI Gene ID: 9923
    neXtProt AC: NX_Q9NUA8

  • Chr Location
    1p36; chr1:22428838-22531157 (+)  GRCh38.p2

  • HomoloGene
    Vertebrate Homology Class 8912
    1 human;1 mouse;1 rat;1 chimpanzee;1 rhesus macaque;1 cattle;1 dog;1 chicken;1 western clawed frog;1 zebrafish
  • HCOP
    human homology predictions: ZBTB40
  • Gene Tree
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    8 phenotype references
  • All Mutations and Alleles
    10
  • Chemically induced (other)
    2
  • Gene trapped
    5
  • Targeted
    3
  • Genomic Mutations
    3 involving Zbtb40
  • Incidental Mutations
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000009824 VEGA Gene Model | MGI Sequence Detail 69070 C57BL/6J ±  kb
transcript OTTMUST00000022755 VEGA | MGI Sequence Detail 7192 Not Applicable  
polypeptide OTTMUSP00000010384 VEGA | MGI Sequence Detail 1258 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    1116 from dbSNP Build 142
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 45
    cDNA 45

    Microarray probesets 3
Other
Accession IDs
less
MGI:2685417
References
more
  • Summaries
    All 27
    Developmental Gene Expression 1
    Gene Ontology 2
    Phenotypes 8
  • Earliest
    J:82808 Strausberg RL, et al., Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Proc Natl Acad Sci U S A. 2002 Dec 24;99(26):16899-903
  • Latest
    J:152068 Friedel RH, et al., EUCOMM--the European conditional mouse mutagenesis program. Brief Funct Genomic Proteomic. 2007 Sep;6(3):180-5

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
04/26/2016
MGI 6.03
The Jackson Laboratory