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Tigd3 Gene Detail
Summary
  • Symbol
    Tigd3
  • Name
    tigger transposable element derived 3
  • Synonyms
    MGC:67569
  • Feature Type
    protein coding gene
  • IDs
    MGI:2681860
    NCBI Gene: 332359
Location & Maps
more
  • Sequence Map
    Chr19:5891139-5894107 bp, - strand
  • From Ensembl annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      2969 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 19, 4.34 cM
  • Mapping Data
    1 experiment
Homology
more
  • Human Ortholog
    TIGD3, tigger transposable element derived 3
  • Vertebrate Orthologs
    7
  • Human Ortholog
    TIGD3, tigger transposable element derived 3
    Orthology source: HomoloGene, HGNC
  • Links
    NCBI Gene ID: 220359
    neXtProt AC: NX_Q6B0B8

  • Chr Location
    11q13.1; chr11:65354811-65357613 (+)  GRCh38.p2

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
  • All Mutations and Alleles
    3
  • Gene trapped
    1
  • Targeted
    2
  • Incidental Mutations
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000044390 Ensembl Gene Model | MGI Sequence Detail 2969 C57BL/6J ±  kb
transcript ENSMUST00000055911 Ensembl | MGI Sequence Detail 2114 Not Applicable  
polypeptide ENSMUSP00000059302 Ensembl | MGI Sequence Detail 470 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    24 from dbSNP Build 142
Protein
Information
less
  • UniProt
    1 Sequence
  • Protein Ontology
    PR:000016333 tigger transposable element-derived protein 3
  • InterPro Domains
    IPR004875 DDE superfamily endonuclease domain
    IPR007889 DNA binding HTH domain, Psq-type
    IPR009057 Homeodomain-like
    IPR006600 HTH CenpB-type DNA-binding domain
Molecular
Reagents
less
  • All nucleic 5
    cDNA 5

    Microarray probesets 2
References
more
  • Summaries
    All 21
    Gene Ontology 2
    Phenotypes 3
  • Earliest
    J:82808 Strausberg RL, et al., Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Proc Natl Acad Sci U S A. 2002 Dec 24;99(26):16899-903
  • Latest
    J:142754 Hansen GM, et al., Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Genome Res. 2008 Oct;18(10):1670-9

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
09/27/2016
MGI 6.05
The Jackson Laboratory