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Yjefn3 Gene Detail
Summary
  • Symbol
    Yjefn3
  • Name
    YjeF N-terminal domain containing 3
  • Synonyms
    LOC234365
  • Feature Type
    protein coding gene
  • IDs
    MGI:2681845
    NCBI Gene: 234365
  • Alliance
Location &
Maps
more
  • Sequence Map
    Chr8:69887788-69902712 bp, - strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 8, 34.02 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    177 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2681845
protein coding gene Chr8:69887788-69902712 (-)
129S1/SvImJ MGP_129S1SvImJ_G0033681
protein coding gene Chr8:70116920-70131634 (-)
A/J MGP_AJ_G0033664
protein coding gene Chr8:67268890-67284076 (-)
AKR/J MGP_AKRJ_G0033589
protein coding gene Chr8:69175542-69190267 (-)
BALB/cJ MGP_BALBcJ_G0033660
protein coding gene Chr8:67495164-67510236 (-)
C3H/HeJ MGP_C3HHeJ_G0033370
protein coding gene Chr8:69836830-69851488 (-)
C57BL/6NJ MGP_C57BL6NJ_G0034177
protein coding gene Chr8:72784833-72799818 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0031121
protein coding gene Chr8:62092726-62108352 (-)
CAST/EiJ MGP_CASTEiJ_G0032695
protein coding gene Chr8:69296879-69316333 (-)
CBA/J MGP_CBAJ_G0033348
protein coding gene Chr8:75422828-75437509 (-)
DBA/2J MGP_DBA2J_G0033502
protein coding gene Chr8:66995355-67010469 (-)
FVB/NJ MGP_FVBNJ_G0033443
protein coding gene Chr8:66091458-66107120 (-)
LP/J MGP_LPJ_G0033589
protein coding gene Chr8:70167229-70181945 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0033487
protein coding gene Chr8:78080050-78094982 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0034195
protein coding gene Chr8:69357521-69373139 (-)
PWK/PhJ MGP_PWKPhJ_G0032403
protein coding gene Chr8:66279935-66295099 (-)
SPRET/EiJ MGP_SPRETEiJ_G0032239
protein coding gene Chr8:68333782-68349876 (-)
WSB/EiJ MGP_WSBEiJ_G0032810
protein coding gene Chr8:69726484-69742179 (-)



Homology
more
  • Human Ortholog
    YJEFN3, YjeF N-terminal domain containing 3
  • Human Ortholog
    YJEFN3, YjeF N-terminal domain containing 3
    Orthology source: HGNC
  • Links
    NCBI Gene ID: 374887
    neXtProt AC: NX_A6XGL0
    UniProt: A6XGL0

  • Chr Location
    19p13.11; chr19:19528861-19537584 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotype references
  • All Mutations and Alleles
    4
  • Chemically induced (other)
    1
  • Gene trapped
    2
  • Targeted
    1
  • Genomic Mutations
    1 involving Yjefn3
  • Find Mice (IMSR)
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
  • Literature Summary
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000048967 Ensembl Gene Model | MGI Sequence Detail 14925 C57BL/6J ±  kb
transcript ENSMUST00000152938 Ensembl | MGI Sequence Detail 785 Not Applicable  
polypeptide ENSMUSP00000118931 Ensembl | MGI Sequence Detail 251 Not Applicable  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 5
    cDNA 5

    Microarray probesets 1
Other
Accession IDs
less
MGI:2685021
References
more
  • Summaries
    All 21
    Developmental Gene Expression 1
    Gene Ontology 1
    Phenotypes 5
  • Earliest
    J:86696 Zambrowicz BP, et al., Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Proc Natl Acad Sci U S A. 2003 Nov 25;100(24):14109-14
  • Latest
    J:237827 Gineste C, et al., In vivo and in vitro investigations of heterozygous nebulin knock-out mice disclose a mild skeletal muscle phenotype. Neuromuscul Disord. 2013 Apr;23(4):357-69

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
04/16/2019
MGI 6.13
The Jackson Laboratory