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Dixdc1 Gene Detail
Summary
  • Symbol
    Dixdc1
  • Name
    DIX domain containing 1
  • Synonyms
    4930563F16Rik, Ccd1, MGC:61302, mKIAA1735
  • Feature Type
    protein coding gene
  • IDs
    MGI:2679721
    NCBI Gene: 330938
  • Alliance
    gene page
  • Transcription Start Sites
    8 TSS
Location &
Maps
more
  • Sequence Map
    Chr9:50574052-50650817 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 9, 27.75 cM, cytoband B
  • Mapping Data
    4 experiments
Strain
Comparison
more
  • SNPs within 2kb
    736 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2679721
 protein coding gene Chr9:50574052-50650900 (-)
129S1/SvImJ MGP_129S1SvImJ_G0034786
 protein coding gene Chr9:49562743-49639265 (-)
A/J MGP_AJ_G0034767
 protein coding gene Chr9:48047150-48126681 (-)
AKR/J MGP_AKRJ_G0034695
 protein coding gene Chr9:49056774-49137008 (-)
BALB/cJ MGP_BALBcJ_G0034759
 protein coding gene Chr9:47772137-47851494 (-)
C3H/HeJ MGP_C3HHeJ_G0034469
 protein coding gene Chr9:49544993-49626384 (-)
C57BL/6NJ MGP_C57BL6NJ_G0035279
 protein coding gene Chr9:50946384-51022409 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0032192
 protein coding gene Chr9:47511280-47587435 (-)
CAST/EiJ MGP_CASTEiJ_G0033791
 protein coding gene Chr9:49493743-49573771 (-)
CBA/J MGP_CBAJ_G0034441
 protein coding gene Chr9:52751490-52830337 (-)
DBA/2J MGP_DBA2J_G0034600
 protein coding gene Chr9:47906852-47985533 (-)
FVB/NJ MGP_FVBNJ_G0034541
 protein coding gene Chr9:47124122-47201121 (-)
LP/J MGP_LPJ_G0034681
 protein coding gene Chr9:49919699-49996948 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0034584
 protein coding gene Chr9:54348167-54428886 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0035300
 protein coding gene Chr9:49031530-49117470 (-)
PWK/PhJ MGP_PWKPhJ_G0033496
 protein coding gene Chr9:47884340-47963311 (-)
SPRET/EiJ MGP_SPRETEiJ_G0033331
 protein coding gene Chr9:49342785-49422033 (-)
WSB/EiJ MGP_WSBEiJ_G0033904
 protein coding gene Chr9:49042872-49122538 (-)



Homology
more
  • Human Ortholog
    DIXDC1, DIX domain containing 1
  • Vertebrate Orthologs
    4
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    DIXDC1, DIX domain containing 1
  • Synonyms
    CCD1
  • Links
    NCBI Gene ID: 85458
    neXtProt AC: NX_Q155Q3
    UniProt: Q155Q3

  • Chr Location
    11q23.1; chr11:111927144-112022653 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    8 phenotypes from 2 alleles in 2 genetic backgrounds
    12 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Mice homozygous for a knock-out allele exhibit reduced spontaneous locomotor activity, abnormal behavior in the elevated plus maze, and deficits in startle reactivity.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    33
  • GO References
    10
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    1046
  • Tissues
    149
  • cDNA Data
    56
  • Literature Summary
    13
  • Comparison Matrix
    Gene Expression + Phenotype
    • Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic ENSMUSG00000032064 Ensembl Gene Model | MGI Sequence Detail 76766 C57BL/6J ±  kb
    transcript ENSMUST00000034566 Ensembl | MGI Sequence Detail 5709 Not Applicable  
    polypeptide ENSMUSP00000034566 Ensembl | MGI Sequence Detail 711 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    Molecular
    Reagents
    less
    • All nucleic 63
      cDNA 57
      Primer pair 6

      Microarray probesets 4
    Other
    Accession IDs
    less
    MGI:1922606
    References
    more
    • Summaries
      All 58
      Developmental Gene Expression 13
      Gene Ontology 10
      Phenotypes 12
    • Earliest
      J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
    • Latest
      J:335689 Kulesh B, et al., Quantitative trait loci on chromosomes 9 and 19 modulate AII amacrine cell number in the mouse retina. Front Neurosci. 2023;17:1078168
    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
    Citing These Resources
    Funding Information
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    Send questions and comments to User Support.     		last database update
    04/16/2024
    MGI 6.23     		The Jackson Laboratory