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Spata31f3 Gene Detail
Summary
  • Symbol
    Spata31f3
  • Name
    spermatogenesis associated 31 subfamily F member 3
  • Synonyms
    BC049635, Fam205c, MGC:58387
  • Feature Type
    protein coding gene
  • IDs
    MGI:2679716
    NCBI Gene: 277773
  • Alliance
    gene page
  • Transcription Start Sites
    4 TSS
Location &
Maps
more
  • Sequence Map
    Chr4:42868004-42874234 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 4, 22.88 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    122 from dbSNP Build 142
  • Strain Annotations
    17
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2679716
 protein coding gene Chr4:42868003-42874246 (-)
129S1/SvImJ MGP_129S1SvImJ_G0028192
 protein coding gene Chr4:40940068-40946298 (-)
A/J MGP_AJ_G0028148
 protein coding gene Chr4:39505912-39512142 (-)
AKR/J MGP_AKRJ_G0028100
 protein coding gene Chr4:40401648-40407880 (-)
BALB/cJ MGP_BALBcJ_G0028168
 protein coding gene Chr4:39592954-39599184 (-)
C3H/HeJ MGP_C3HHeJ_G0027890
 protein coding gene Chr4:41032381-41038611 (-)
C57BL/6NJ MGP_C57BL6NJ_G0028609
 protein coding gene Chr4:42468553-42474783 (-)
CAROLI/EiJ no annotation
CAST/EiJ MGP_CASTEiJ_G0027330
 protein coding gene Chr4:40495007-40552006 (-)
CBA/J MGP_CBAJ_G0027856
 protein coding gene Chr4:43801931-43808132 (-)
DBA/2J MGP_DBA2J_G0028005
 protein coding gene Chr4:39416486-39422687 (-)
FVB/NJ MGP_FVBNJ_G0027972
 protein coding gene Chr4:38642422-38648623 (-)
LP/J MGP_LPJ_G0028104
 protein coding gene Chr4:41013286-41019516 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0027996
 protein coding gene Chr4:47062385-47068617 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0028645
 protein coding gene Chr4:40593173-40599374 (-)
PWK/PhJ MGP_PWKPhJ_G0027056
 protein coding gene Chr4:39451434-39457677 (-)
SPRET/EiJ MGP_SPRETEiJ_G0026882
 protein coding gene Chr4:40150828-40157065 (-)
WSB/EiJ MGP_WSBEiJ_G0027410
 protein coding gene Chr4:40505218-40511449 (-)



Homology
more
  • Human Ortholog
    SPATA31F3, SPATA31 subfamily F member 3
  • Vertebrate Orthologs
    2
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    SPATA31F3, SPATA31 subfamily F member 3
  • Synonyms
    FAM205C, FAM205CP
  • Links
    NCBI Gene ID: 100129969
    neXtProt AC: NX_A6NFA0
    UniProt: A6NFA0

  • Chr Location
    9p13.3; chr9:34889066-34895764 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    11 phenotypes from 1 allele in 1 genetic background
    7 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    1
  • GO References
    1
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    16
  • Comparison Matrix
    Gene Expression + Phenotype
    • Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic ENSMUSG00000050141 Ensembl Gene Model | MGI Sequence Detail 6231 C57BL/6J ±  kb
    transcript ENSMUST00000107978 Ensembl | MGI Sequence Detail 1451 Not Applicable  
    polypeptide ENSMUSP00000103612 Ensembl | MGI Sequence Detail 371 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    Molecular
    Reagents
    less
    • All nucleic 17
      cDNA 17

      Microarray probesets 1
    References
    more
    • Summaries
      All 25
      Gene Ontology 1
      Phenotypes 7
    • Earliest
      J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
    • Latest
      J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
    Citing These Resources
    Funding Information
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    Send questions and comments to User Support.     		last database update
    04/16/2024
    MGI 6.23     		The Jackson Laboratory