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Bahcc1 Gene Detail
Summary
  • Symbol
    Bahcc1
  • Name
    BAH domain and coiled-coil containing 1
  • Synonyms
    MGC:79150
  • Feature Type
    protein coding gene
  • IDs
    MGI:2679272
    NCBI Gene: 268515
  • Alliance
    gene page
  • Transcription Start Sites
    4 TSS
Location &
Maps
more
  • Sequence Map
    Chr11:120232947-120292296 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 11, 83.96 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    174 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2679272
 protein coding gene Chr11:120232870-120292297 (+)
129S1/SvImJ MGP_129S1SvImJ_G0019493
 protein coding gene Chr11:124682001-124745113 (+)
A/J MGP_AJ_G0019461
 protein coding gene Chr11:119137960-119201588 (+)
AKR/J MGP_AKRJ_G0019431
 protein coding gene Chr11:122718390-122778787 (+)
BALB/cJ MGP_BALBcJ_G0019436
 protein coding gene Chr11:119494867-119555597 (+)
C3H/HeJ MGP_C3HHeJ_G0019242
 protein coding gene Chr11:123053286-123115695 (+)
C57BL/6NJ MGP_C57BL6NJ_G0019885
 protein coding gene Chr11:128458481-128518815 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0017510
 protein coding gene Chr11:116142633-116203472 (+)
CAST/EiJ MGP_CASTEiJ_G0018796
 protein coding gene Chr11:124529525-124594677 (+)
CBA/J MGP_CBAJ_G0019213
 protein coding gene Chr11:133480546-133547907 (+)
DBA/2J MGP_DBA2J_G0019325
 protein coding gene Chr11:118508804-118568517 (+)
FVB/NJ MGP_FVBNJ_G0019317
 protein coding gene Chr11:118201087-118262536 (+)
LP/J MGP_LPJ_G0019397
 protein coding gene Chr11:124985862-125050733 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0019350
 protein coding gene Chr11:132325754-132393881 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0019924
 protein coding gene Chr11:123405681-123464371 (+)
PWK/PhJ MGP_PWKPhJ_G0018562
 protein coding gene Chr11:119934304-119995025 (+)
SPRET/EiJ MGP_SPRETEiJ_G0018354
 protein coding gene Chr11:123172896-123236190 (+)
WSB/EiJ MGP_WSBEiJ_G0018848
 protein coding gene Chr11:123402458-123464823 (+)



Homology
more
  • Human Ortholog
    BAHCC1, BAH domain and coiled-coil containing 1
  • Vertebrate Orthologs
    9
  • Human Ortholog
    BAHCC1, BAH domain and coiled-coil containing 1
    Orthology source: HomoloGene, HGNC
  • Synonyms
    BAHD2
  • Links
    NCBI Gene ID: 57597
    neXtProt AC: NX_Q9P281
    UniProt: Q9P281

  • Chr Location
    17q25.3; chr17:81395431-81466332 (+)  GRCh38.p7
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    4 phenotypes from 1 allele in 1 genetic background
    8 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
immune system
integument
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
neoplasm
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
vision/eye

Click cells to view annotations.
Homozygous mutation of this gene results in perinatal lethality for the majority of mutants. Those that survive exhibit hind leg motor dysfunction.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    1
  • GO References
    1
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    44
  • Tissues
    31
  • cDNA Data
    66
  • Literature Summary
    2
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000039741 Ensembl Gene Model | MGI Sequence Detail 59350 C57BL/6J ±  kb
transcript ENSMUST00000122148 Ensembl | MGI Sequence Detail 10712 Not Applicable  
polypeptide ENSMUSP00000112827 Ensembl | MGI Sequence Detail 2643 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 66
    cDNA 66

    Microarray probesets 1
References
more
  • Summaries
    All 26
    Developmental Gene Expression 2
    Gene Ontology 1
    Phenotypes 8
  • Earliest
    J:82808 Strausberg RL, et al., Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Proc Natl Acad Sci U S A. 2002 Dec 24;99(26):16899-903
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
02/11/2020
MGI 6.14 		The Jackson Laboratory