Bahcc1 MGI Mouse Gene Detail - MGI:2679272 - BAH domain and coiled-coil containing 1

Bahcc1 Gene Detail

Symbol

Bahcc1
Name

BAH domain and coiled-coil containing 1
Synonyms

MGC:79150

Feature Type

protein coding gene
IDs

MGI:2679272
NCBI Gene: 268515
Alliance

gene page

Sequence Map

Chr11:120232947-120292282 bp, + strand
From VEGA annotation of GRCm38

Mouse Genome Browser
Download
Sequence

59336 bp ± kb flank
Genome Browsers

VEGA | Ensembl | UCSC | NCBI

Genetic Map

Chromosome 11, 83.96 cM
Mapping Data

1 experiment

Human Ortholog

BAHCC1, BAH domain and coiled-coil containing 1

Vertebrate Orthologs

9

Human Ortholog

BAHCC1, BAH domain and coiled-coil containing 1
Orthology source: HomoloGene, HGNC
Synonyms

BAHD2
Links

HGNC:29279

NCBI Gene ID: 57597

neXtProt AC: NX_Q9P281

UniProt: Q9P281
Chr Location

17q25.3; chr17:81395431-81466332 (+) GRCh38.p7

HomoloGene

Vertebrate Homology Class 129585
1 human;1 mouse;1 rat;1 dog;1 chicken;2 zebrafish;1 frog, western clawed;1 macaque, rhesus
HCOP

human homology predictions: BAHCC1
Gene Tree

Bahcc1

less

Phenotype Summary

4 phenotypes from 1 allele in 1 genetic background
8 phenotype references

Phenotype Overview

Blue squares indicate phenotypes directly attributed to mutations/alleles of this gene.

adipose tissue	behavior/neurological	cardiovascular system	cellular	craniofacial	digestive/alimentary system	embryo	endocrine/exocrine glands	growth/size/body	hearing/vestibular/ear	hematopoietic system	homeostasis/metabolism	integument	immune system	limbs/digits/tail	liver/biliary system	mortality/aging	muscle	nervous system	pigmentation	renal/urinary system	reproductive system	respiratory system	skeleton	taste/olfaction	neoplasm	vision/eye

Click cells to view annotations.

All Mutations and Alleles

41
Gene trapped

37
Targeted

4
Incidental Mutations

Mutagenetix , APF , CvDC
Find Mice (IMSR)

61 strains or lines available

Homozygous mutation of this gene results in perinatal lethality for the majority of mutants. Those that survive exhibit hind leg motor dysfunction.

less

All GO Annotations

6
GO References

1

External Resources

FuncBase

Molecular Function

carbohydrate derivative binding	cytoskeletal protein binding	DNA binding	enzyme regulator	hydrolase	ligase	lipid binding	oxidoreductase	receptor binding	RNA binding	transcription	transferase	transporter

Biological Process

nucleic acid-templated transcription	carbohydrate derivative metabolism	cell death	cell differentiation	cell proliferation	cellular component organization	establishment of localization	homeostatic process	immune system process	lipid metabolic process	protein metabolic process	response to stimulus	signaling	system development

Cellular Component

cell projection	cytoplasmic vesicle	cytoskeleton	cytosol	endoplasmic reticulum	endosome	extracellular region	Golgi apparatus	mitochondrion	non-membrane-bounded organelle	nucleus	organelle envelope	organelle lumen	plasma membrane	synapse	vacuole

Click cells to view annotations.

less

Expression Overview

GXD's primary emphasis is on endogenous gene expression during development. Click on grid cells to view annotations.

Blue cells = expressed in wild-type.
Gray triangles = other expression annotations only
(e.g. absence of expression or data from mutants).

early conceptus	embryo ectoderm	embryo endoderm	embryo mesoderm	embryo mesenchyme	extraembryonic component	alimentary system	auditory system	branchial arches	cardiovascular system	connective tissue	endocrine system	exocrine system	hemolymphoid system	integumental system	limbs	liver and biliary system	musculoskeletal system	nervous system	olfactory system	reproductive system	respiratory system	urinary system	visual system

Click cells to view annotations.

Assay Results

44
Tissues

31
cDNA Data

65
Literature Summary

2

Images

Tissue x Stage Matrix

Other Mouse Links

Allen Institute

GENSAT

GEO

Expression Atlas
Other Vertebrate Links

Xenbase bahcc1

ZFIN bahcc1b

less

Bahcc1 interacts with 328 markers (Mir1b, Mir7-1, Mir7-2, ...) View All

less

All Sequences

57
RefSeq

25
UniProt

3
CCDS

CCDS49003.1, CCDS83943.1
UniGene

309498

			Length	Strain/Species	Flank
genomic	OTTMUSG00000004133	VEGA Gene Model \| MGI Sequence Detail	59336	C57BL/6J	± kb
transcript	OTTMUST00000009327	VEGA \| MGI Sequence Detail	10712	Not Applicable
polypeptide	OTTMUSP00000004538	VEGA \| MGI Sequence Detail	2643	Not Applicable

less

SNPs within 2kb

174 from dbSNP Build 142

less

UniProt

3 Sequences
InterPro Domains

IPR001025 Bromo adjacent homology (BAH) domain

less

All nucleic 65

cDNA 65

Microarray probesets 1

Summaries

All 25

Developmental Gene Expression 2

Gene Ontology 1

Phenotypes 8
Earliest

J:82808 Strausberg RL, et al., Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Proc Natl Acad Sci U S A. 2002 Dec 24;99(26):16899-903
Latest

J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42

Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources Funding Information Warranty Disclaimer & Copyright Notice Send questions and comments to User Support.	last database update 06/19/2018 MGI 6.12