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BC048671 Gene Detail
Summary
  • Symbol
    BC048671
  • Name
    cDNA sequence BC048671
  • Synonyms
    MGC:58841
  • Feature Type
    protein coding gene
  • IDs
    MGI:2679261
    NCBI Gene: 243535
  • Alliance
  • Transcription Start Sites
    10 TSS
Location &
Maps
more
  • Sequence Map
    Chr6:90301270-90305449 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 6, 40.12 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    37 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2679261
protein coding gene Chr6:90301219-90305449 (+)
129S1/SvImJ MGP_129S1SvImJ_G0031033
protein coding gene Chr6:91831482-91835704 (+)
A/J MGP_AJ_G0031001
protein coding gene Chr6:88341657-88345875 (+)
AKR/J MGP_AKRJ_G0030933
protein coding gene Chr6:90806127-90810357 (+)
BALB/cJ MGP_BALBcJ_G0031013
protein coding gene Chr6:88286695-88290925 (+)
C3H/HeJ MGP_C3HHeJ_G0030695
protein coding gene Chr6:93631489-93635713 (-)
C57BL/6NJ MGP_C57BL6NJ_G0031472
protein coding gene Chr6:94252839-94257069 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0028641
protein coding gene Chr6:86331842-86336142 (+)
CAST/EiJ MGP_CASTEiJ_G0030120
protein coding gene Chr6:90917537-90921770 (+)
CBA/J MGP_CBAJ_G0030699
protein coding gene Chr6:97782741-97786965 (+)
DBA/2J MGP_DBA2J_G0030852
protein coding gene Chr6:87534853-87539077 (+)
FVB/NJ MGP_FVBNJ_G0030806
protein coding gene Chr6:86736374-86740600 (+)
LP/J MGP_LPJ_G0030932
protein coding gene Chr6:91797736-91801960 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0030840
protein coding gene Chr6:101871935-101876161 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0031499
protein coding gene Chr6:90654472-90658700 (+)
PWK/PhJ MGP_PWKPhJ_G0029836
protein coding gene Chr6:86477121-86481349 (+)
SPRET/EiJ MGP_SPRETEiJ_G0029665
protein coding gene Chr6:89541668-89545891 (+)
WSB/EiJ MGP_WSBEiJ_G0030204
protein coding gene Chr6:91113757-91117983 (+)



Homology
more
  • Human Ortholog
    C3orf22, chromosome 3 open reading frame 22
  • Vertebrate Orthologs
    2
  • Human Ortholog
    C3orf22, chromosome 3 open reading frame 22
    Orthology source: HGNC
  • Links
    NCBI Gene ID: 152065
    neXtProt AC: NX_Q8N5N4
    UniProt: Q8N5N4

  • Chr Location
    3q21.3; chr3:126524439-126558965 (-)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    9 phenotype references
Gene Ontology
(GO)
Classifications
less
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 243535 NCBI Gene Model | MGI Sequence Detail 4180 C57BL/6J ±  kb
transcript NM_177738 RefSeq | MGI Sequence Detail 1211 C57BL/6  
polypeptide Q8C5S3 UniProt | EBI | MGI Sequence Detail 137 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
  • InterPro Domains
    IPR038782 Uncharacterized protein C3orf22
Molecular
Reagents
less
  • All nucleic 10
    cDNA 10

    Microarray probesets 3
References
more
  • Summaries
    All 26
    Phenotypes 9
  • Earliest
    J:21726 Champion KM, et al., Identification of a heritable deficiency of the folate-dependent enzyme 10-formyltetrahydrofolate dehydrogenase in mice. Proc Natl Acad Sci U S A. 1994 Nov 22;91(24):11338-42
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
10/01/2019
MGI 6.14
The Jackson Laboratory