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Ssh2 Gene Detail
Summary
  • Symbol
    Ssh2
  • Name
    slingshot protein phosphatase 2
  • Synonyms
    SSH-2
  • Feature Type
    protein coding gene
  • IDs
    MGI:2679255
    NCBI Gene: 237860
  • Gene Overview
    MyGene.info: SSH2
  • Alliance
  • Transcription Start Sites
    4 TSS
Location &
Maps
more
  • Sequence Map
    Chr11:77216287-77460220 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 11, 46.36 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    400 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2679255
protein coding gene Chr11:77216179-77460220 (.)
129S1/SvImJ MGP_129S1SvImJ_G0018745
protein coding gene Chr11:78098528-78363957 (+)
A/J MGP_AJ_G0018711
protein coding gene Chr11:75159827-75406152 (+)
AKR/J MGP_AKRJ_G0018681
protein coding gene Chr11:77445032-77691756 (+)
BALB/cJ MGP_BALBcJ_G0018685
protein coding gene Chr11:75545988-75788272 (+)
C3H/HeJ MGP_C3HHeJ_G0018498
protein coding gene Chr11:77468889-77719531 (+)
C57BL/6NJ MGP_C57BL6NJ_G0019136
protein coding gene Chr11:80564029-80820015 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0016771
protein coding gene Chr11:72143630-72388507 (+)
CAST/EiJ MGP_CASTEiJ_G0018052
protein coding gene Chr11:77869271-78109681 (+)
CBA/J MGP_CBAJ_G0018468
protein coding gene Chr11:84067857-84331203 (+)
DBA/2J MGP_DBA2J_G0018577
protein coding gene Chr11:74748767-74990386 (+)
FVB/NJ MGP_FVBNJ_G0018567
protein coding gene Chr11:74316149-74561956 (+)
LP/J MGP_LPJ_G0018648
protein coding gene Chr11:78695507-78929735 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0018593
protein coding gene Chr11:84525492-84786486 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0019176
protein coding gene Chr11:77656534-77904540 (+)
PWK/PhJ MGP_PWKPhJ_G0017823
protein coding gene Chr11:75500803-75746741 (+)
SPRET/EiJ MGP_SPRETEiJ_G0017614
protein coding gene Chr11:77254187-77518869 (+)
WSB/EiJ MGP_WSBEiJ_G0018105
protein coding gene Chr11:77472837-77720994 (+)



Homology
more
  • Human Ortholog
    SSH2, slingshot protein phosphatase 2
  • Vertebrate Orthologs
    9
  • Human Ortholog
    SSH2, slingshot protein phosphatase 2
    Orthology source: HomoloGene, HGNC
  • Synonyms
    SSH-2, SSH-2L
  • Links
    NCBI Gene ID: 85464
    neXtProt AC: NX_Q76I76
    UniProt: Q76I76

  • Chr Location
    17q11.2; chr17:29625938-29930239 (-)  GRCh38.p7

  • HomoloGene
    Vertebrate Homology Class 14116
    1 human;1 mouse;1 rat;1 chimpanzee;1 cattle;1 dog;1 chicken;1 frog, western clawed;1 macaque, rhesus
  • HCOP
    human homology predictions: SSH2
  • Gene Tree
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    12 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000037926 Ensembl Gene Model | MGI Sequence Detail 243934 C57BL/6J ±  kb
transcript ENSMUST00000181283 Ensembl | MGI Sequence Detail 4475 Not Applicable  
polypeptide ENSMUSP00000137933 Ensembl | MGI Sequence Detail 1429 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 96
    cDNA 96

    Microarray probesets 3
Other
Accession IDs
less
MGI:2144600
References
more
  • Summaries
    All 40
    Developmental Gene Expression 2
    Gene Ontology 7
    Phenotypes 12
  • Earliest
    J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
  • Latest
    J:265628 Gaudet P, et al., Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief Bioinform. 2011 Sep;12(5):449-62

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/13/2018
MGI 6.13
The Jackson Laboratory