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Ssh2 Gene Detail
Summary
  • Symbol
    Ssh2
  • Name
    slingshot homolog 2 (Drosophila)
  • Synonyms
    SSH-2
  • Feature Type
    protein coding gene
  • IDs
    MGI:2679255
    NCBI Gene: 237860
  • Gene Overview
    MyGene.info: SSH2
Location & Maps
more
  • Sequence Map
    Chr11:77216287-77460220 bp, + strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      243934 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 11, 46.36 cM
  • Mapping Data
    2 experiments
Homology
more
  • Human Ortholog
    SSH2, slingshot protein phosphatase 2
  • Vertebrate Orthologs
    9
  • Human Ortholog
    SSH2, slingshot protein phosphatase 2
    Orthology source: HGNC, HomoloGene
  • Synonyms
    SSH-2, SSH-2L
  • Links
    NCBI Gene ID: 85464
    neXtProt AC: NX_Q76I76

  • Chr Location
    17q11.2; chr17:29625938-29930239 (-)  GRCh38.p2

  • HomoloGene
    Vertebrate Homology Class 14116
    1 human;1 mouse;1 rat;1 chimpanzee;1 rhesus macaque;1 cattle;1 dog;1 chicken;1 western clawed frog
  • HCOP
    human homology predictions: SSH2
  • Gene Tree
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    12 phenotype references
  • All Mutations and Alleles
    6
  • Chemically induced (other)
    1
  • Gene trapped
    4
  • Targeted
    1
  • Genomic Mutations
    2 involving Ssh2
  • Incidental Mutations
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
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Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000006248 VEGA Gene Model | MGI Sequence Detail 243934 C57BL/6J ±  kb
transcript OTTMUST00000112187 VEGA | MGI Sequence Detail 4475 Not Applicable  
polypeptide OTTMUSP00000062936 VEGA | MGI Sequence Detail 1429 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    400 from dbSNP Build 142
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 94
    cDNA 94

    Microarray probesets 3
Other
Accession IDs
less
MGI:2144600
References
more
  • Summaries
    All 30
    Developmental Gene Expression 2
    Gene Ontology 5
    Phenotypes 12
  • Earliest
    J:86696 Zambrowicz BP, et al., Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Proc Natl Acad Sci U S A. 2003 Nov 25;100(24):14109-14
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
08/17/2016
MGI 6.05
The Jackson Laboratory