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Mir99a Gene Detail
Summary
  • Symbol
    Mir99a
  • Name
    microRNA 99a
  • Synonyms
    Mirn99a, mmu-mir-99a
  • Feature Type
    miRNA gene
  • IDs
    MGI:2676912
    NCBI Gene: 387229
  • Alliance
Location &
Maps
more
  • Sequence Map
    Chr16:77598936-77599000 bp, + strand
  • From miRBase annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 16, 44.71 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    13 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2676912
miRNA gene Chr16:77598936-77599000 (+)
129S1/SvImJ MGP_129S1SvImJ_G0008289
miRNA gene Chr16:77729356-77729420 (+)
A/J MGP_AJ_G0008277
miRNA gene Chr16:74296773-74296837 (+)
AKR/J MGP_AKRJ_G0008260
miRNA gene Chr16:76530660-76530724 (+)
BALB/cJ MGP_BALBcJ_G0008262
miRNA gene Chr16:74693459-74693523 (+)
C3H/HeJ MGP_C3HHeJ_G0008204
miRNA gene Chr16:76986690-76986754 (+)
C57BL/6NJ MGP_C57BL6NJ_G0008457
miRNA gene Chr16:80217256-80217320 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0007517
miRNA gene Chr16:72763749-72763813 (+)
CAST/EiJ MGP_CASTEiJ_G0008074
miRNA gene Chr16:77392118-77392182 (+)
CBA/J MGP_CBAJ_G0008173
miRNA gene Chr16:83640646-83640710 (+)
DBA/2J MGP_DBA2J_G0008206
miRNA gene Chr16:74143535-74143599 (+)
FVB/NJ MGP_FVBNJ_G0008230
miRNA gene Chr16:73500628-73500692 (+)
LP/J MGP_LPJ_G0008288
miRNA gene Chr16:77468432-77468496 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0008194
miRNA gene Chr16:86854397-86854461 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0008447
miRNA gene Chr16:76866160-76866224 (+)
PWK/PhJ MGP_PWKPhJ_G0007995
miRNA gene Chr16:74341808-74341872 (+)
SPRET/EiJ MGP_SPRETEiJ_G0007884
miRNA gene Chr16:76482935-76482999 (+)
WSB/EiJ MGP_WSBEiJ_G0008152
miRNA gene Chr16:77085890-77085954 (+)



Homology
more
  • Human Ortholog
    MIR99A, microRNA 99a
  • Human Ortholog
    MIR99A, microRNA 99a
    Orthology source: HGNC
  • Synonyms
    mir-99a, MIRN99A
  • Links
    NCBI Gene ID: 407055

  • Chr Location
    chr21:16539089-16539169 (+)  GRCh38.p7

Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    7 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • Assay Results
  • Tissues
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
  • All Sequences
  • RefSeq
Representative SequencesLengthStrain/SpeciesFlank
genomic 387229 NCBI Gene Model | MGI Sequence Detail 65 C57BL/6J ±  kb
transcript NR_029535 RefSeq | MGI Sequence Detail 65 C57BL/6  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 2
    Other 2
Other Database
Links
less
References
more
  • Summaries
    All 27
    Developmental Gene Expression 4
    Diseases 1
    Gene Ontology 7
    Phenotypes 7
  • Earliest
    J:84907 Lagos-Quintana M, et al., Identification of tissue-specific microRNAs from mouse. Curr Biol. 2002 Apr 30;12(9):735-9
  • Latest
    J:262380 Watson-Scales S, et al., Analysis of motor dysfunction in Down Syndrome reveals motor neuron degeneration. PLoS Genet. 2018 May;14(5):e1007383

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
06/18/2019
MGI 6.14
The Jackson Laboratory