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Mir208a Gene Detail
Summary
  • Symbol
    Mir208a
  • Name
    microRNA 208a
  • Synonyms
    mir-208, Mirn208, Mirn208a, mmu-mir-208, mmu-mir-208a
  • Feature Type
    miRNA gene
  • IDs
    MGI:2676883
    NCBI Gene: 387204
  • Alliance
Location &
Maps
more
  • Sequence Map
    Chr14:54949060-54949142 bp, - strand
  • From miRBase annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 14, 28.00 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    46 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2676883
miRNA gene Chr14:54949060-54949142 (-)
129S1/SvImJ MGP_129S1SvImJ_G0008122
miRNA gene Chr14:48933151-48933233 (-)
A/J MGP_AJ_G0008109
miRNA gene Chr14:47967264-47967346 (-)
AKR/J MGP_AKRJ_G0008087
miRNA gene Chr14:49713008-49713090 (-)
BALB/cJ MGP_BALBcJ_G0008091
miRNA gene Chr14:47944316-47944398 (-)
C3H/HeJ MGP_C3HHeJ_G0008035
miRNA gene Chr14:49406892-49406974 (-)
C57BL/6NJ MGP_C57BL6NJ_G0008281
miRNA gene Chr14:51404597-51404679 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0007372
miRNA gene Chr14:46380023-46380105 (-)
CAST/EiJ MGP_CASTEiJ_G0007913
miRNA gene Chr14:45646010-45646092 (-)
CBA/J MGP_CBAJ_G0008003
miRNA gene Chr14:52966460-52966542 (-)
DBA/2J MGP_DBA2J_G0008039
miRNA gene Chr14:47709097-47709179 (-)
FVB/NJ MGP_FVBNJ_G0008062
miRNA gene Chr14:47169119-47169201 (-)
LP/J MGP_LPJ_G0008122
miRNA gene Chr14:49951197-49951279 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0008031
miRNA gene Chr14:52352422-52352504 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0008277
miRNA gene Chr14:48890247-48890329 (-)
PWK/PhJ MGP_PWKPhJ_G0007835
miRNA gene Chr14:44245837-44245919 (-)
SPRET/EiJ MGP_SPRETEiJ_G0007730
miRNA gene Chr14:44875047-44875129 (-)
WSB/EiJ MGP_WSBEiJ_G0007990
miRNA gene Chr14:49187874-49187956 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    9 phenotypes from 2 alleles in 2 genetic backgrounds
    1 phenotype from multigenic genotypes
    6 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
immune system
integument
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
neoplasm
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
vision/eye

Click cells to view annotations.
Mice homozygous for null mutations display normal gross heart morphology but abnormal cardiac physiology.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • Literature Summary
  • Comparison Matrix
  • Interactions
    less
    Sequences &
    Gene Models
    less
    • All Sequences
    • RefSeq
    Representative SequencesLengthStrain/SpeciesFlank
    genomic 387204 NCBI Gene Model | MGI Sequence Detail 83 C57BL/6J ±  kb
    transcript NR_029724 RefSeq | MGI Sequence Detail 83 C57BL/6  
    For the selected sequence
    Molecular
    Reagents
    less
    • All nucleic 2
      Other 2
    Other Database
    Links
    less
    References
    more
    • Summaries
      All 22
      Developmental Gene Expression 7
      Gene Ontology 4
      Phenotypes 6
    • Earliest
      J:84908 Lagos-Quintana M, et al., New microRNAs from mouse and human. RNA. 2003 Feb;9(2):175-9
    • Latest
      J:222613 Ding J, et al., Trbp regulates heart function through microRNA-mediated Sox6 repression. Nat Genet. 2015 Jul;47(7):776-83

    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
    Citing These Resources
    Funding Information
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    last database update
    12/04/2018
    MGI 6.13
    The Jackson Laboratory