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Mir1a-1
Gene Detail
Symbol

Name
ID
Mir1a-1
microRNA 1a-1
MGI:2676869
Synonyms
Mirn1-1, Mirn1b, Mirn1c, Mirn1d, mmu-mir-1-1, mmu-mir-1a-1
Feature Type
miRNA gene
Genetic Map
Chromosome 2
102.92 cM
Detailed Genetic Map ± 1 cM


Mapping data(1)
Sequence Map
Chr2:180389048-180389124 bp, + strand
From miRBase annotation of GRCm38

  77 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
Gene Tree: Mir1a-1
Mutations,
alleles, and
phenotypes
All mutations/alleles(1) : Targeted(1)
Interactions
Mir1a-1 interacts with 5422 markers (0610030E20Rik, 0610037L13Rik, 1110002E22Rik, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (6 annotations)
Process gene silencing by miRNA, negative regulation of gene expression, ...
Expression
Literature Summary: (26 records)
Data Summary: Results (29)    Tissues (14)    Images (8)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 12
Northern blot 3
RT-PCR 14
External Resources: GEO   Expression Atlas
Molecular
reagents
All nucleic(4) Primer pair(1) Other(3)
Other database
links
Ensembl Gene ModelENSMUSG00000070144 (Evidence)
Entrez Gene387136 (Evidence)
miRBaseMI0000139
International Mouse Knockout Project StatusMir1a-1
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic 387136 NCBI Gene Model | MGI Sequence Detail 77 C57BL/6J ±  kb
transcript NR_029528 RefSeq | MGI Sequence Detail 77 C57BL/6 

For the selected sequences
All sequences(7) RefSeq(1)
Polymorphisms
SNPs within 2kb(42 from dbSNP Build 137)
References
(Earliest) J:14774 Jakoby WB, et al., Glutathione transferases: nomenclature. Biochem Pharmacol. 1984 Aug 15;33(16):2539-40
(Latest) J:208342 Yang D, et al., miR-335 promotes mesendodermal lineage segregation and shapes a transcription factor gradient in the endoderm. Development. 2014 Feb;141(3):514-25
All references(42)
Other
accession IDs
MGI:2676870, MGI:2676871

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
12/09/2014
MGI 5.20
The Jackson Laboratory