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Mir16-1
Gene Detail
Symbol

Name
ID
Member of
Mir16-1
microRNA 16-1
MGI:2676843
Mirc30 cluster
Synonyms
miR-16, mir-16-1, Mirn16, Mirn16-1, mmu-mir-16-1
Feature Type
miRNA gene
Genetic Map
Chromosome 14
33.16 cM
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr14:61631880-61631972 bp, - strand
From miRBase annotation of GRCm38

  93 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
Gene Tree: Mir16-1
Mutations,
alleles, and
phenotypes
All mutations/alleles(3) : Targeted(3)
Genomic Mutations involving Mir16-1 (3)
Alleles Annotated to Human Diseases(2)   
Interactions
Mir16-1 interacts with 6664 markers (0610010F05Rik, 0610030E20Rik, 0610037L13Rik, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (4 annotations)
Process BMP signaling pathway, regulation of cell cycle, ...
Component micro-ribonucleoprotein complex
Expression
Literature Summary: (23 records)
Data Summary: Results (44)    Tissues (15)    Images (22)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 28
Northern blot 3
RT-PCR 13
External Resources: GEO   Expression Atlas
Molecular
reagents
All nucleic(7) Primer pair(4) Other(3)
Other database
links
Ensembl Gene ModelENSMUSG00000092995 (Evidence)
Entrez Gene387134 (Evidence)
miRBaseMI0000565
International Mouse Knockout Project StatusMir16-1
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic 387134 NCBI Gene Model | MGI Sequence Detail 93 C57BL/6J ±  kb
transcript NR_029734 RefSeq | MGI Sequence Detail 93 C57BL/6 

For the selected sequences
All sequences(5) RefSeq(1)
Polymorphisms
SNPs within 2kb(9 from dbSNP Build 137)
References
(Earliest) J:84907 Lagos-Quintana M, et al., Identification of tissue-specific microRNAs from mouse. Curr Biol. 2002 Apr 30;12(9):735-9
(Latest) J:211935 Dorval V, et al., Gene and MicroRNA transcriptome analysis of Parkinson's related LRRK2 mouse models. PLoS One. 2014;9(1):e85510
All references(40)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
12/09/2014
MGI 5.20
The Jackson Laboratory