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Mir16-1 Gene Detail
Summary
  • Symbol
    Mir16-1
  • Name
    microRNA 16-1
  • Synonyms
    miR-16, mir-16-1, Mirn16, Mirn16-1, mmu-mir-16-1
  • Feature Type
    miRNA gene
  • IDs
    MGI:2676843
    NCBI Gene: 387134
  • Member of
    Mirc30 cluster
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr14:61869329-61869421 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
  • Genetic Map
    Chromosome 14, 33.16 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    9 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2676843
miRNA gene Chr14:61869329-61869421 (-)
129S1/SvImJ MGP_129S1SvImJ_G0008127
miRNA gene Chr14:56023772-56023864 (-)
A/J MGP_AJ_G0008114
miRNA gene Chr14:54800697-54800789 (-)
AKR/J MGP_AKRJ_G0008092
miRNA gene Chr14:56757095-56757187 (-)
BALB/cJ MGP_BALBcJ_G0008096
miRNA gene Chr14:54754775-54754867 (-)
C3H/HeJ MGP_C3HHeJ_G0008040
miRNA gene Chr14:56386736-56386828 (-)
C57BL/6NJ MGP_C57BL6NJ_G0008286
miRNA gene Chr14:58751978-58752070 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0007377
miRNA gene Chr14:52771474-52771565 (-)
CAST/EiJ MGP_CASTEiJ_G0007918
miRNA gene Chr14:52781978-52782070 (-)
CBA/J MGP_CBAJ_G0008008
miRNA gene Chr14:60444293-60444385 (-)
DBA/2J MGP_DBA2J_G0008044
miRNA gene Chr14:54459165-54459257 (-)
FVB/NJ MGP_FVBNJ_G0008067
miRNA gene Chr14:53883480-53883572 (-)
LP/J MGP_LPJ_G0008127
miRNA gene Chr14:57055966-57056058 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0008036
miRNA gene Chr14:59757301-59757393 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0008282
miRNA gene Chr14:55901400-55901492 (-)
PWK/PhJ MGP_PWKPhJ_G0007840
miRNA gene Chr14:51130917-51131009 (-)
SPRET/EiJ MGP_SPRETEiJ_G0007735
miRNA gene Chr14:51826081-51826173 (-)
WSB/EiJ MGP_WSBEiJ_G0007995
miRNA gene Chr14:56218698-56218790 (-)



Homology
more
  • Human Ortholog
    MIR16-1, microRNA 16-1
  • Vertebrate Orthologs
    1
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    MIR16-1, microRNA 16-1
  • Synonyms
    mir-16-1, MIRN16-1, miRNA16-1
  • Links
    NCBI Gene ID: 406950

  • Chr Location
    chr13:50048973-50049061 (-)  GRCh38

Human Diseases
less
  • References
    2 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    11 phenotype references
  • All Mutations and Alleles
    5
  • Chemically induced (other)
    1
  • Spontaneous
    1
  • Targeted
    3
  • Genomic Mutations
    4 involving Mir16-1
  • Find Mice (IMSR)
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • Literature Summary
Sequences &
Gene Models
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  • All Sequences
  • RefSeq
Representative SequencesLengthStrain/SpeciesFlank
genomic 387134 NCBI Gene Model | MGI Sequence Detail 93 C57BL/6J ±  kb
transcript NR_029734 RefSeq | MGI Sequence Detail 93 C57BL/6  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 8
    Primer pair 6
    Other 2
Other Database
Links
less
miRBase MI0000565
References
more
  • Summaries
    All 81
    Developmental Gene Expression 28
    Diseases 2
    Gene Ontology 11
    Phenotypes 11
  • Earliest
    J:84907 Lagos-Quintana M, et al., Identification of tissue-specific microRNAs from mouse. Curr Biol. 2002 Apr 30;12(9):735-9
  • Latest
    J:344186 Munoz-Gallardo MDM, et al., miR-195b is required for proper cellular homeostasis in the elderly. Sci Rep. 2024 Jan 8;14(1):810

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
03/12/2024
MGI 6.23
The Jackson Laboratory