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Mir138-1 Gene Detail
Summary
  • Symbol
    Mir138-1
  • Name
    microRNA 138-1
  • Synonyms
    Mirn138, Mirn138-1, mmu-mir-138-1
  • Feature Type
    miRNA gene
  • IDs
    MGI:2676823
    NCBI Gene: 387156
  • Alliance
Location &
Maps
more
  • Sequence Map
    Chr9:122682876-122682974 bp, + strand
  • From miRBase annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 9, 73.05 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    1 from dbSNP Build 142
  • Strain Annotations
    17
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2676823
miRNA gene Chr9:122682876-122682974 (.)
129S1/SvImJ MGP_129S1SvImJ_G0009251
miRNA gene Chr9:125680142-125680240 (+)
A/J MGP_AJ_G0009231
miRNA gene Chr9:120875680-120875778 (+)
AKR/J MGP_AKRJ_G0009221
miRNA gene Chr9:124128715-124128813 (+)
BALB/cJ MGP_BALBcJ_G0009215
miRNA gene Chr9:120798012-120798110 (+)
C3H/HeJ MGP_C3HHeJ_G0009155
miRNA gene Chr9:124559962-124560060 (+)
C57BL/6NJ MGP_C57BL6NJ_G0009458
miRNA gene Chr9:129137600-129137698 (+)
CAROLI/EiJ no annotation
CAST/EiJ MGP_CASTEiJ_G0008986
miRNA gene Chr9:124588379-124588477 (+)
CBA/J MGP_CBAJ_G0009122
miRNA gene Chr9:133861097-133861195 (+)
DBA/2J MGP_DBA2J_G0009152
miRNA gene Chr9:120323334-120323432 (+)
FVB/NJ MGP_FVBNJ_G0009169
miRNA gene Chr9:119244779-119244877 (+)
LP/J MGP_LPJ_G0009249
miRNA gene Chr9:126018675-126018773 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0009136
miRNA gene Chr9:134726899-134726997 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0009428
miRNA gene Chr9:124578552-124578650 (+)
PWK/PhJ MGP_PWKPhJ_G0008911
miRNA gene Chr9:120775678-120775776 (+)
SPRET/EiJ MGP_SPRETEiJ_G0008748
miRNA gene Chr9:124655921-124656019 (+)
WSB/EiJ MGP_WSBEiJ_G0009080
miRNA gene Chr9:124424891-124424989 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype from 1 allele in 1 genetic background
    4 phenotype references
Mice homozygous for a targeted deletion are viable with no observed pathologies.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
  • All Sequences
  • RefSeq
Representative SequencesLengthStrain/SpeciesFlank
genomic 387156 NCBI Gene Model | MGI Sequence Detail 99 C57BL/6J ±  kb
transcript NR_029819 RefSeq | MGI Sequence Detail 99 C57BL/6  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 2
    Primer pair 1
    Other 1
Other Database
Links
less
References
more
  • Summaries
    All 23
    Developmental Gene Expression 8
    Gene Ontology 4
    Phenotypes 4
  • Earliest
    J:84907 Lagos-Quintana M, et al., Identification of tissue-specific microRNAs from mouse. Curr Biol. 2002 Apr 30;12(9):735-9
  • Latest
    J:263363 Lin HP, et al., Egr2-dependent microRNA-138 is dispensable for peripheral nerve myelination. Sci Rep. 2018 Feb 28;8(1):3817

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
12/04/2018
MGI 6.13
The Jackson Laboratory