About   Help   FAQ
Mir135a-1 Gene Detail
Summary
  • Symbol
    Mir135a-1
  • Name
    microRNA 135a-1
  • Synonyms
    Mirn135, Mirn135a-1, mmu-mir-135a-1
  • Feature Type
    miRNA gene
  • IDs
    MGI:2676820
    NCBI Gene: 387153
  • Alliance
Location &
Maps
more
  • Sequence Map
    Chr9:106154124-106154213 bp, + strand
  • From miRBase annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 9, 57.46 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    29 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2676820
miRNA gene Chr9:106154124-106154213 (+)
129S1/SvImJ MGP_129S1SvImJ_G0009230
miRNA gene Chr9:107933402-107933491 (+)
A/J MGP_AJ_G0009211
miRNA gene Chr9:104048293-104048382 (+)
AKR/J MGP_AKRJ_G0009200
miRNA gene Chr9:106636095-106636184 (+)
BALB/cJ MGP_BALBcJ_G0009195
miRNA gene Chr9:103729526-103729615 (+)
C3H/HeJ MGP_C3HHeJ_G0009136
miRNA gene Chr9:107045241-107045330 (+)
C57BL/6NJ MGP_C57BL6NJ_G0009437
miRNA gene Chr9:110896605-110896694 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0008291
miRNA gene Chr9:101543399-101543488 (+)
CAST/EiJ MGP_CASTEiJ_G0008966
miRNA gene Chr9:106931241-106931330 (+)
CBA/J MGP_CBAJ_G0009101
miRNA gene Chr9:114787250-114787339 (+)
DBA/2J MGP_DBA2J_G0009131
miRNA gene Chr9:103507284-103507373 (+)
FVB/NJ MGP_FVBNJ_G0009149
miRNA gene Chr9:102275606-102275695 (+)
LP/J MGP_LPJ_G0009228
miRNA gene Chr9:108156308-108156397 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0009115
miRNA gene Chr9:116449464-116449553 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0009407
miRNA gene Chr9:106869432-106869521 (+)
PWK/PhJ MGP_PWKPhJ_G0008891
miRNA gene Chr9:103801142-103801231 (+)
SPRET/EiJ MGP_SPRETEiJ_G0008730
miRNA gene Chr9:106933832-106933921 (+)
WSB/EiJ MGP_WSBEiJ_G0009060
miRNA gene Chr9:106777379-106777468 (+)



Homology
more
  • Human Ortholog
    MIR135A1, microRNA 135a-1
  • Human Ortholog
    MIR135A1, microRNA 135a-1
    Orthology source: HGNC
  • Synonyms
    mir-135a-1, MIRN135-1, MIRN135A1
  • Links
    NCBI Gene ID: 406925

  • Chr Location
    chr3:52294219-52294308 (-)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype reference
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
  • All Sequences
  • RefSeq
Representative SequencesLengthStrain/SpeciesFlank
genomic 387153 NCBI Gene Model | MGI Sequence Detail 90 C57BL/6J ±  kb
transcript NR_029549 RefSeq | MGI Sequence Detail 90 C57BL/6  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 5
    Primer pair 3
    Other 2
Other Database
Links
less
References
more
  • Summaries
    All 25
    Developmental Gene Expression 10
    Gene Ontology 4
    Phenotypes 1
  • Earliest
    J:84907 Lagos-Quintana M, et al., Identification of tissue-specific microRNAs from mouse. Curr Biol. 2002 Apr 30;12(9):735-9
  • Latest
    J:232481 Caronia-Brown G, et al., Expression and functional analysis of the Wnt/beta-catenin induced mir-135a-2 locus in embryonic forebrain development. Neural Dev. 2016;11:9

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
10/01/2019
MGI 6.14
The Jackson Laboratory