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H2-M11 Gene Detail
Summary
  • Symbol
    H2-M11
  • Name
    histocompatibility 2, M region locus 11
Location &
Maps
more
  • Sequence Map
    Chr17:36857967-36860142 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 17, 19.16 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • Strain Annotations
    19
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2676637
 protein coding gene Chr17:36857967-36861165 (+)
129S1/SvImJ ENSMUSG00200046856
 protein coding gene Chr17:32323519-32325691 (+)
A/J ENSMUSG00195035995
 protein coding gene Chr17:33537488-33539655 (+)
AKR/J ENSMUSG00220050551
 protein coding gene Chr17:32343966-32346137 (+)
BALB/cJ ENSMUSG00180030654
 protein coding gene Chr17:32999701-33001874 (+)
C3H/HeJ ENSMUSG00175032736
 protein coding gene Chr17:32231607-32233778 (+)
C57BL/6NJ ENSMUSG00215045906
 protein coding gene Chr17:32151247-32153423 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0021552
 protein coding gene Chr17:33571261-33573578 (+)
CAST/EiJ ENSTCUG00005050956
 protein coding gene Chr17:33395795-33397965 (+)
CBA/J ENSMUSG00210038096
 protein coding gene Chr17:32053408-32055579 (+)
DBA/2J ENSMUSG00185041653
 protein coding gene Chr17:34980670-34982844 (+)
FVB/NJ ENSMUSG00205051560
 protein coding gene Chr17:32594260-32596427 (+)
JF1/MsJ ENSUMUG00000044193
 protein coding gene Chr17:33921770-33923941 (+)
LP/J ENSMUSG00230053536
 protein coding gene Chr17:36118883-36121055 (+)
NOD/ShiLtJ ENSMUSG00190031383
 protein coding gene Chr17:32212709-32214876 (+)
NZO/HlLtJ ENSMUSG00225052907
 protein coding gene Chr17:38071090-38073261 (+)
PWK/PhJ ENSLUMG00010035243
 protein coding gene Chr17:31808252-31810422 (+)
SPRET/EiJ ENSMSPG00010049854
 protein coding gene Chr17:33110996-33113138 (+)
WSB/EiJ ENSIUOG00005047712
 protein coding gene Chr17:33110233-33112403 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    4 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    12
  • GO References
    3
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    597
Sequences &
Gene Models
less
  • All Sequences
    30
  • RefSeq
    4
  • UniProt
    2
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000037537 Ensembl Gene Model | MGI Sequence Detail 2176 C57BL/6J ±  kb
transcript ENSMUST00000041964 Ensembl | MGI Sequence Detail 1006 Not Applicable  
polypeptide ENSMUSP00000042522 Ensembl | MGI Sequence Detail 335 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    2 Sequences
  • InterPro Domains
    IPR050208 Antigen-presenting and immune regulatory MHC class I-related
    IPR003597 Immunoglobulin C1-set
    IPR007110 Immunoglobulin-like domain
    IPR036179 Immunoglobulin-like domain superfamily
    IPR013783 Immunoglobulin-like fold
    IPR003006 Immunoglobulin/major histocompatibility complex, conserved site
    IPR011162 MHC classes I/II-like antigen recognition protein
    IPR001039 MHC class I alpha chain, alpha1 alpha2 domains
    IPR011161 MHC class I-like antigen recognition-like
    IPR037055 MHC class I-like antigen recognition-like superfamily
Molecular
Reagents
less

  • Microarray probesets 1
References
more
  • Summaries
    All 15
    Gene Ontology 3
    Phenotypes 4
  • Earliest
    J:87316 Ishii T, et al., Combinatorial coexpression of neural and immune multigene families in mouse vomeronasal sensory neurons. Curr Biol. 2003 Mar 4;13(5):394-400
  • Latest
    J:207447 Leinders-Zufall T, et al., A family of nonclassical class I MHC genes contributes to ultrasensitive chemodetection by mouse vomeronasal sensory neurons. J Neurosci. 2014 Apr 9;34(15):5121-33
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/15/2026
MGI 6.29 		The Jackson Laboratory