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H2-M11 Gene Detail
Summary
  • Symbol
    H2-M11
  • Name
    histocompatibility 2, M region locus 11
  • Feature Type
    protein coding gene
  • IDs
    MGI:2676637
    NCBI Gene: 224754
  • Alliance
Location &
Maps
more
  • Sequence Map
    Chr17:36547075-36549250 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 17, 19.16 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2676637
protein coding gene Chr17:36547075-36549252 (+)
129S1/SvImJ MGP_129S1SvImJ_G0023677
protein coding gene Chr17:36900708-36902879 (+)
A/J MGP_AJ_G0023635
protein coding gene Chr17:35717289-35719456 (+)
AKR/J MGP_AKRJ_G0023606
protein coding gene Chr17:36143512-36145683 (+)
BALB/cJ MGP_BALBcJ_G0023642
protein coding gene Chr17:35913294-35915467 (+)
C3H/HeJ MGP_C3HHeJ_G0023404
protein coding gene Chr17:36671509-36673680 (+)
C57BL/6NJ MGP_C57BL6NJ_G0024080
protein coding gene Chr17:38438911-38441079 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0021552
protein coding gene Chr17:33571261-33573578 (+)
CAST/EiJ MGP_CASTEiJ_G0022891
protein coding gene Chr17:36724818-36726988 (+)
CBA/J MGP_CBAJ_G0023381
protein coding gene Chr17:39986126-39988297 (+)
DBA/2J MGP_DBA2J_G0023506
protein coding gene Chr17:35117920-35120093 (+)
FVB/NJ MGP_FVBNJ_G0023479
protein coding gene Chr17:34752565-34754732 (+)
LP/J MGP_LPJ_G0023583
protein coding gene Chr17:37382310-37384481 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0023502
protein coding gene Chr17:38776140-38778307 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0024126
protein coding gene Chr17:36432672-36434843 (+)
PWK/PhJ MGP_PWKPhJ_G0022643
protein coding gene Chr17:33915468-33917638 (+)
SPRET/EiJ MGP_SPRETEiJ_G0022462
protein coding gene Chr17:34631678-34633820 (+)
WSB/EiJ MGP_WSBEiJ_G0022958
protein coding gene Chr17:36761109-36763279 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    3 phenotype references
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
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Sequences &
Gene Models
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  • All Sequences
  • RefSeq
  • UniProt
  • UniGene
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000037537 Ensembl Gene Model | MGI Sequence Detail 2176 C57BL/6J ±  kb
transcript ENSMUST00000041964 Ensembl | MGI Sequence Detail 1006 Not Applicable  
polypeptide ENSMUSP00000042522 Ensembl | MGI Sequence Detail 335 Not Applicable  
For the selected sequence
Protein
Information
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  • UniProt
    2 Sequences
  • InterPro Domains
    IPR003597 Immunoglobulin C1-set
    IPR007110 Immunoglobulin-like domain
    IPR036179 Immunoglobulin-like domain superfamily
    IPR013783 Immunoglobulin-like fold
    IPR003006 Immunoglobulin/major histocompatibility complex, conserved site
    IPR011162 MHC classes I/II-like antigen recognition protein
    IPR001039 MHC class I alpha chain, alpha1 alpha2 domains
    IPR011161 MHC class I-like antigen recognition-like
    IPR037055 MHC class I-like antigen recognition-like superfamily
Molecular
Reagents
less

  • Microarray probesets 1
References
more
  • Summaries
    All 12
    Gene Ontology 1
    Phenotypes 3
  • Earliest
    J:87316 Ishii T, et al., Combinatorial coexpression of neural and immune multigene families in mouse vomeronasal sensory neurons. Curr Biol. 2003 Mar 4;13(5):394-400
  • Latest
    J:207447 Leinders-Zufall T, et al., A family of nonclassical class I MHC genes contributes to ultrasensitive chemodetection by mouse vomeronasal sensory neurons. J Neurosci. 2014 Apr 9;34(15):5121-33

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
08/13/2019
MGI 6.14
The Jackson Laboratory