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Dnajc13
Gene Detail
Symbol

Name
ID
Dnajc13
DnaJ (Hsp40) homolog, subfamily C, member 13
MGI:2676368
Synonyms
D030002L11Rik, LOC382100, mKIAA0678, Rme8
Feature Type
protein coding gene
Genetic Map
Chromosome 9
56.61 cM
Detailed Genetic Map ± 1 cM


Mapping data(3)
Sequence Map
Chr9:104151282-104262930 bp, - strand
From VEGA annotation of GRCm38

  111649 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:13574  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog

HCOP human homology predictions: DNAJC13
Gene Tree: Dnajc13

Human
homologs
DNAJC13, DnaJ (Hsp40) homolog, subfamily C, member 13
Orthology source: HomoloGene, HGNC

IDs:
NCBI Gene ID: 23317
neXtProt AC: NX_O75165

Human Synonyms: PARK21, RME8

Human Chr (Location): 3q22.1; chr3:132417532-132539032 (+)  GRCh38.p2

Disease Associations: (1) Diseases Associated with Human DNAJC13

Mutations,
alleles, and
phenotypes
All mutations/alleles(42) : Gene trapped(42)
Incidental mutations (data from Mutagenetix , APF , CvDC )
Interactions
Dnajc13 interacts with 292 markers (Mir1a-1, Mir1a-2, Mir1b, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (11 annotations)
Process endosome organization, osteoblast differentiation, ...
Component early endosome membrane, endosome membrane, ...
Function molecular_function
External Resources: FuncBase
Expression
Literature Summary: (1 records)
Data Summary: Results (5)    Tissues (1)    Images (5)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 5
cDNA source data(148)
Other mouse links: Allen Institute   GEO   Expression Atlas
Other vertebrate links: Xenbase dnajc13    NEW 
Molecular
reagents
All nucleic(148) cDNA(148)
Microarray probesets(9)
Other database
links
VEGA Gene Model OTTMUSG00000049291 (Evidence)
Ensembl Gene Model ENSMUSG00000032560 (Evidence)
Entrez Gene 235567 (Evidence)
UniGene 217256
DFCI TC1638908, TC1606263
DoTS DT.493025, DT.102557416
NIA Mouse Gene Index U031270
Consensus CDS Project CCDS52904.1
International Mouse Phenotyping Consortium Status Dnajc13
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000049291 VEGA Gene Model | MGI Sequence Detail 111649 C57BL/6J ±  kb
transcript OTTMUST00000125941 VEGA | MGI Sequence Detail 6747 Not Applicable 
polypeptide OTTMUSP00000068159 VEGA | MGI Sequence Detail 2248 Not Applicable 

For the selected sequences
All sequences(81) RefSeq(9) UniProt(10)
Polymorphisms
SNPs within 2kb(852 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR011989 Armadillo-like helical
InterPro IPR016024 Armadillo-type fold
InterPro IPR001623 DnaJ domain
InterPro IPR025640 Domain of unknown function DUF4339
InterPro IPR003169 GYF
Protein Ontology PR:000031725 DnaJ homolog subfamily C member 13
References
(Earliest) J:93290 Araki K, et al., Exchangeable gene trap using the Cre/mutated lox system. Cell Mol Biol (Noisy-le-grand). 1999 Jul;45(5):737-50
(Latest) J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
All references(31)
Other
accession IDs
MGI:2685970

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
06/23/2015
MGI 5.22
The Jackson Laboratory