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Fam43a
Gene Detail
 Symbol
Name
ID
Fam43a
family with sequence similarity 43, member A
MGI:2676309
Feature Type protein coding gene
Genetic Map
Chromosome 16
21.34 cM
Detailed Genetic Map ± 1 cM


Mapping data(1)
Sequence Map
Chr16:30599723-30602797 bp, + strand
From VEGA annotation of GRCm38

  3075 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:17800  Vertebrate Homology Class
1 human; 1 mouse; 2 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 1 zebrafish

Gene Tree: Fam43a

Human
homologs
Human Homolog FAM43A, family with sequence similarity 43, member A
NCBI Gene ID 131583
neXtProt AC  NX_Q8N2R8
Human Chr (Location)  3q29; chr3:194685893-194689037 (+)  GRCh38
Mutations,
alleles, and
phenotypes
All mutations/alleles(6) : Gene trapped(5) Targeted(1)
Incidental mutations (data from Mutagenetix , APF )
Interactions
Fam43a interacts with 203 markers (Mir7-1, Mir9-1, Mir9-2, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (3 annotations)
Process biological_process
Component cellular_component
Function molecular_function
External Resources: FuncBase
Expression
cDNA source data(8)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(8) cDNA(8)
Microarray probesets(4)
Other database
links
VEGA Gene ModelOTTMUSG00000027744 (Evidence)
Ensembl Gene ModelENSMUSG00000046546 (Evidence)
Entrez Gene224093 (Evidence)
DFCITC1576754
DoTSDT.525721, DT.99839973
NIA Mouse Gene IndexU016995
Consensus CDS ProjectCCDS28103.1
International Mouse Knockout Project StatusFam43a
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000027744 VEGA Gene Model | MGI Sequence Detail 3075 C57BL/6J ±  kb
transcript OTTMUST00000068656 VEGA | MGI Sequence Detail 3075 Not Applicable 
polypeptide OTTMUSP00000034757 VEGA | MGI Sequence Detail 424 Not Applicable 

For the selected sequences
All sequences(26) RefSeq(2) UniProt(2)
Polymorphisms SNPs within 2kb(11 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR006020 Phosphotyrosine interaction domain
InterPro IPR011993 Pleckstrin homology-like domain
Protein Ontology PR:000032059 protein FAM43A
References (Earliest) J:82808 Strausberg RL, et al., Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Proc Natl Acad Sci U S A. 2002 Dec 24;99(26):16899-903
(Latest) J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
All references(27)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
08/19/2014
MGI 5.19
The Jackson Laboratory