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Fam43a Gene Detail
Summary
  • Symbol
    Fam43a
  • Name
    family with sequence similarity 43, member A
  • Feature Type
    protein coding gene
  • IDs
    MGI:2676309
    NCBI Gene: 224093
  • Gene Overview
    MyGene.info: FAM43A
  • Alliance
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr16:30599723-30602797 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 16, 21.34 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    11 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2676309
protein coding gene Chr16:30599723-30602797 (.)
129S1/SvImJ MGP_129S1SvImJ_G0022715
protein coding gene Chr16:28514726-28518044 (+)
A/J MGP_AJ_G0022678
protein coding gene Chr16:27204053-27207179 (+)
AKR/J MGP_AKRJ_G0022652
protein coding gene Chr16:28232481-28235555 (+)
BALB/cJ MGP_BALBcJ_G0022682
protein coding gene Chr16:27376774-27379838 (+)
C3H/HeJ MGP_C3HHeJ_G0022447
protein coding gene Chr16:28335417-28338491 (+)
C57BL/6NJ MGP_C57BL6NJ_G0023131
protein coding gene Chr16:29131063-29134137 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0020649
protein coding gene Chr16:27635143-27638305 (+)
CAST/EiJ MGP_CASTEiJ_G0021975
protein coding gene Chr16:28434170-28438678 (+)
CBA/J MGP_CBAJ_G0022417
protein coding gene Chr16:30365978-30369052 (+)
DBA/2J MGP_DBA2J_G0022550
protein coding gene Chr16:27078089-27081163 (+)
FVB/NJ MGP_FVBNJ_G0022525
protein coding gene Chr16:27056991-27060061 (+)
LP/J MGP_LPJ_G0022617
protein coding gene Chr16:28336820-28339894 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0022544
protein coding gene Chr16:29859589-29862680 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0023143
protein coding gene Chr16:28192402-28195466 (+)
PWK/PhJ MGP_PWKPhJ_G0021714
protein coding gene Chr16:27389269-27392459 (+)
SPRET/EiJ MGP_SPRETEiJ_G0021545
protein coding gene Chr16:27953964-27957016 (+)
WSB/EiJ MGP_WSBEiJ_G0022019
protein coding gene Chr16:28137806-28140887 (+)



Homology
more
  • Human Ortholog
    FAM43A, family with sequence similarity 43 member A
  • Vertebrate Orthologs
    11
  • Human Ortholog
    FAM43A, family with sequence similarity 43 member A
    Orthology source: HomoloGene, HGNC
  • Links
    NCBI Gene ID: 131583
    neXtProt AC: NX_Q8N2R8
    UniProt: Q8N2R8

  • Chr Location
    3q29; chr3:194685893-194689037 (+)  GRCh38.p7

  • HomoloGene
    Vertebrate Homology Class 17800
    1 human;1 mouse;2 rat;1 chimpanzee;1 cattle;1 dog;1 chicken;1 zebrafish;1 frog, western clawed;1 macaque, rhesus
  • HCOP
    human homology predictions: FAM43A
  • Gene Tree
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
Gene Ontology
(GO)
Classifications
less
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 224093 NCBI Gene Model | MGI Sequence Detail 3075 C57BL/6J ±  kb
transcript NM_177632 RefSeq | MGI Sequence Detail 3075 C57BL/6  
polypeptide Q8BUP8 UniProt | EBI | MGI Sequence Detail 424 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 9
    cDNA 9

    Microarray probesets 4
References
more
  • Summaries
    All 22
    Phenotypes 3
  • Earliest
    J:82808 Strausberg RL, et al., Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Proc Natl Acad Sci U S A. 2002 Dec 24;99(26):16899-903
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/06/2018
MGI 6.13
The Jackson Laboratory