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Nlrp9a Gene Detail
Summary
  • Symbol
    Nlrp9a
  • Name
    NLR family, pyrin domain containing 9A
  • Synonyms
    D7Ertd565e, Nalp9a, Nalp-theta
  • Feature Type
    protein coding gene
  • IDs
    MGI:2675292
    NCBI Gene: 233001
  • Alliance
Location &
Maps
more
  • Sequence Map
    Chr7:26535023-26574148 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 7, 15.08 cM, cytoband A3
  • Mapping Data
    4 experiments
Strain
Comparison
more
  • SNPs within 2kb
    160 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2675292
protein coding gene Chr7:26535023-26575615 (+)
129S1/SvImJ MGP_129S1SvImJ_G0031887
protein coding gene Chr7:25098698-25141970 (+)
A/J MGP_AJ_G0031867
protein coding gene Chr7:24470544-24522968 (+)
AKR/J MGP_AKRJ_G0031797
protein coding gene Chr7:25081142-25105161 (+)
BALB/cJ MGP_BALBcJ_G0031872
protein coding gene Chr7:24664583-24719567 (+)
C3H/HeJ MGP_C3HHeJ_G0031594
protein coding gene Chr7:25521146-25564967 (+)
C57BL/6NJ MGP_C57BL6NJ_G0032334
protein coding gene Chr7:25925015-25969088 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0029388
protein coding gene Chr7:25726255-25766097 (+)
CAST/EiJ MGP_CASTEiJ_G0030930
protein coding gene Chr7:18804846-18844084 (+)
CBA/J MGP_CBAJ_G0031559
protein coding gene Chr7:26954710-26999759 (+)
DBA/2J MGP_DBA2J_G0031710
protein coding gene Chr7:24336999-24375426 (+)
FVB/NJ MGP_FVBNJ_G0031667
protein coding gene Chr7:24422013-24461624 (+)
LP/J MGP_LPJ_G0031791
protein coding gene Chr7:25366405-25406509 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0031700
protein coding gene Chr7:26586757-26636237 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0032367
protein coding gene Chr7:24704758-24740666 (+)
PWK/PhJ MGP_PWKPhJ_G0030655
protein coding gene Chr7:19221659-19275930 (+)
SPRET/EiJ MGP_SPRETEiJ_G0030484
protein coding gene Chr7:15773869-15820515 (+)
WSB/EiJ MGP_WSBEiJ_G0031034
protein coding gene Chr7:24965246-25009302 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    6 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic 233001 NCBI Gene Model | MGI Sequence Detail 39126 C57BL/6J ±  kb
transcript NM_001048219 RefSeq | MGI Sequence Detail 3349 C57BL/6  
polypeptide Q66X03 UniProt | EBI | MGI Sequence Detail 949 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 11
    cDNA 10
    Primer pair 1

    Microarray probesets 2
Other
Accession IDs
less
MGI:1261858
References
more
  • Summaries
    All 30
    Developmental Gene Expression 1
    Gene Ontology 1
    Phenotypes 6
  • Earliest
    J:60984 Ko MS, et al., Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Development. 2000 Apr;127(8):1737-49
  • Latest
    J:216691 Li L, et al., Identification of cytochrome P450 enzymes critical for lung tumorigenesis by the tobacco-specific carcinogen 4-(methylnitrosamino)-1-(3-pyridyl)-1-butanone (NNK): insights from a novel Cyp2abfgs-null mouse. Carcinogenesis. 2014 Nov;35(11):2584-91

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
10/08/2019
MGI 6.14
The Jackson Laboratory