Bpifb3
Gene Detail

Symbol Name ID

Bpifb3 BPI fold containing family B, member 3 MGI:2675077

Synonyms

Rya3

Feature Type

protein coding gene

Genetic Map

Chromosome 2

75.99 cM
Detailed Genetic Map ± 1 cM


Mapping data(1)

Sequence Map

Chr2:153918230-153932996 bp, + strand From VEGA annotation of GRCm38   14767 bp   ±  kb flank VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser

Mammalian homology

human; rat; cattle; chimpanzee; dog, domestic    (Mammalian Orthology)
Comparative Map (Mouse/Human Bpifb3 ± 2 cM)

Gene Tree: Bpifb3

Human ortholog

BPIFB3 BPI fold containing family B, member 3 NCBI Gene ID 359710
Human Synonyms: C20orf185, dJ726C3.4, LPLUNC3, RYA3
Human Chr20:31643230-31661434 bp, + strand Reference GRCh37.p2 Primary Assembly

Alleles and phenotypes

All alleles(3) : Targeted(3)
 

Mice homozygous for disruptions in this gene display a normal phenotype.

 

Gene Ontology (GO) classifications

All GO classifications: (4 annotations)

Process	biological_process
Component	cytoplasm, extracellular region
Function	lipid binding

External Resources: FuncBase

Expression

cDNA source data(5)
External Resources: Allen Institute   GEO   ArrayExpress

Molecular reagents

All nucleic(5) cDNA(5)
Microarray probesets(2)

Other database links

VEGA Gene Model	OTTMUSG00000016852 (Evidence)
Ensembl Gene Model	ENSMUSG00000068008 (Evidence)
Entrez Gene	378700 (Evidence)
UniGene	55392
DFCI	TC1589591
DoTS	DT.101338524
NIA Mouse Gene Index	U002674
Consensus CDS Project	CCDS16921.1
International Mouse Knockout Project Status	Bpifb3

Sequences

Length	Strain/Species
genomic	OTTMUSG00000016852	VEGA Gene Model | MGI Sequence Detail	14767	C57BL/6J
transcript	OTTMUST00000040942	VEGA | MGI Sequence Detail	1821	Not Applicable
polypeptide	OTTMUSP00000018317	VEGA | MGI Sequence Detail	473	Not Applicable

All sequences(21) RefSeq(2) UniProt(2)

Polymorphisms

SNPs(212 from dbSNP Build 128)

Protein-related information

Resource	ID	Description
InterPro	IPR017943	Bactericidal permeability-increasing protein, alpha/beta domain
InterPro	IPR001124	Lipid-binding serum glycoprotein, C-terminal
InterPro	IPR017942	Lipid-binding serum glycoprotein, N-terminal
Protein Ontology	PR:000009899	long palate, lung and nasal epithelium carcinoma-associated protein 3

References

(Earliest) J:99680 The FANTOM Consortium and RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group), The Transcriptional Landscape of the Mammalian Genome. Science. 2005;309(5740):1559-1563
(Latest) J:174122 Bingle CD, et al., Systematic nomenclature for the PLUNC/PSP/BSP30/SMGB proteins as a subfamily of the BPI fold-containing superfamily. Biochem Soc Trans. 2011 Aug 1;39(4):977-83
All references(28)