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Syt16 Gene Detail
Summary
  • Symbol
    Syt16
  • Name
    synaptotagmin XVI
  • Synonyms
    Strep14, Syt14l, syt14r
  • Feature Type
    protein coding gene
  • IDs
    MGI:2673872
    NCBI Gene: 238266
  • Alliance
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr12:73997610-74267916 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 12, 32.02 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    772 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2673872
protein coding gene Chr12:73997610-74273267 (+)
129S1/SvImJ MGP_129S1SvImJ_G0019842
protein coding gene Chr12:73946951-74227917 (+)
A/J MGP_AJ_G0019800
protein coding gene Chr12:71176571-71454955 (+)
AKR/J MGP_AKRJ_G0019775
protein coding gene Chr12:73316089-73599650 (+)
BALB/cJ MGP_BALBcJ_G0019780
protein coding gene Chr12:71650037-71920813 (+)
C3H/HeJ MGP_C3HHeJ_G0019585
protein coding gene Chr12:73778344-74058257 (+)
C57BL/6NJ MGP_C57BL6NJ_G0020232
protein coding gene Chr12:76224122-76512091 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0017850
protein coding gene Chr12:68610274-68865417 (+)
CAST/EiJ MGP_CASTEiJ_G0019137
protein coding gene Chr12:68565069-68842133 (+)
CBA/J MGP_CBAJ_G0019555
protein coding gene Chr12:79168185-79480963 (+)
DBA/2J MGP_DBA2J_G0019671
protein coding gene Chr12:71056803-71319134 (+)
FVB/NJ MGP_FVBNJ_G0019658
protein coding gene Chr12:69901175-70165082 (+)
LP/J MGP_LPJ_G0019743
protein coding gene Chr12:73956549-74238174 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0019697
protein coding gene Chr12:82248508-82550190 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0020267
protein coding gene Chr12:72810784-73092808 (+)
PWK/PhJ MGP_PWKPhJ_G0018902
protein coding gene Chr12:65386452-65661337 (+)
SPRET/EiJ MGP_SPRETEiJ_G0018697
protein coding gene Chr12:67250745-67534134 (+)
WSB/EiJ MGP_WSBEiJ_G0019188
protein coding gene Chr12:73407735-73686903 (+)



Homology
more
  • Human Ortholog
    SYT16, synaptotagmin 16
  • Vertebrate Orthologs
    9
  • Human Ortholog
    SYT16, synaptotagmin 16
    Orthology source: HomoloGene, HGNC
  • Synonyms
    CHR14SYT, Strep14, SYT14L, syt14r
  • Links
    NCBI Gene ID: 83851
    neXtProt AC: NX_Q17RD7
    UniProt: Q17RD7

  • Chr Location
    14q23.2; chr14:61812156-62112825 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 238266 NCBI Gene Model | MGI Sequence Detail 270307 C57BL/6J ±  kb
transcript NM_001364281 RefSeq | MGI Sequence Detail 3510 C57BL/6  
polypeptide Q7TN83 UniProt | EBI | MGI Sequence Detail 639 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 6
    cDNA 6

    Microarray probesets 4
References
more
  • Summaries
    All 25
    Developmental Gene Expression 1
    Gene Ontology 2
    Phenotypes 5
  • Earliest
    J:85318 Fukuda M, Molecular cloning, expression, and characterization of a novel class of synaptotagmin (Syt XIV) conserved from Drosophila to humans. J Biochem. 2003 May;133(5):641-9
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
10/01/2019
MGI 6.14
The Jackson Laboratory