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Gltscr1l Gene Detail
Summary
  • Symbol
    Gltscr1l
  • Name
    GLTSCR1-like
  • Synonyms
    BC032203, mKIAA0240
  • Feature Type
    protein coding gene
  • IDs
    MGI:2673855
    NCBI Gene: 210982
Location & Maps
more
  • Sequence Map
    Chr17:46798116-46831413 bp, - strand
  • From Ensembl annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      33298 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 17, 22.90 cM
  • Mapping Data
    2 experiments
Homology
more
  • Human Ortholog
    GLTSCR1L, GLTSCR1 like
  • Vertebrate Orthologs
    10
  • Human Ortholog
    GLTSCR1L, GLTSCR1 like
    Orthology source: HGNC, HomoloGene
  • Synonyms
    KIAA0240
  • Links
    NCBI Gene ID: 23506
    neXtProt AC: NX_Q6AI39

  • Chr Location
    6p21.1; chr6:42782052-42868560 (+)  GRCh38.p2

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    4 phenotypes from 1 allele in 1 genetic background
    7 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
  • All Mutations and Alleles
    532
  • Gene trapped
    532
  • Incidental Mutations
    APF , CvDC
Mice homozygous for a gene trapped allele display abnormal embryo turning, embryonic growth retardation, cardiac hypertrophy, and complete embryonic lethality during organogenesis.
Gene Ontology
(GO)
Classifications
less
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000036568 Ensembl Gene Model | MGI Sequence Detail 33298 C57BL/6J ±  kb
transcript ENSMUST00000040624 Ensembl | MGI Sequence Detail 6579 Not Applicable  
polypeptide ENSMUSP00000044833 Ensembl | MGI Sequence Detail 1074 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    378 from dbSNP Build 142
Protein
Information
less
  • UniProt
    2 Sequences
  • InterPro Domains
    IPR015671 GLTSCR protein, conserved region
Molecular
Reagents
less
  • All nucleic 10
    cDNA 9
    Primer pair 1

    Microarray probesets 7
References
more
  • Summaries
    All 26
    Developmental Gene Expression 1
    Phenotypes 7
  • Earliest
    J:82808 Strausberg RL, et al., Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Proc Natl Acad Sci U S A. 2002 Dec 24;99(26):16899-903
  • Latest
    J:142754 Hansen GM, et al., Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Genome Res. 2008 Oct;18(10):1670-9

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
08/23/2016
MGI 6.05
The Jackson Laboratory