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Clec18a Gene Detail
Summary
  • Symbol
    Clec18a
  • Name
    C-type lectin domain family 18, member A
  • Synonyms
    Mrcl
  • Feature Type
    protein coding gene
  • IDs
    MGI:2672935
    NCBI Gene: 353287
Location & Maps
more
  • Sequence Map
    Chr8:111058920-111092426 bp, - strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      33507 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 8, 57.93 cM
  • Mapping Data
    1 experiment
Homology
more
  • Human Ortholog
    CLEC18A, C-type lectin domain family 18 member A
  • Vertebrate Orthologs
    7
  • Human Ortholog
    CLEC18A, C-type lectin domain family 18 member A
    Orthology source: HGNC
  • Synonyms
    MRCL, MRCL1, MRLP2
  • Links
    NCBI Gene ID: 348174
    neXtProt AC: NX_A5D8T8

  • Chr Location
    16q22.1; chr16:69950394-69964347 (+)  GRCh38.p2

  • Human Ortholog
    CLEC18B, C-type lectin domain family 18 member B
    Orthology source: HomoloGene
  • Synonyms
    MRCL2
  • Links
    NCBI Gene ID: 497190
    neXtProt AC: NX_Q6UXF7

  • Chr Location
    16q22.3; chr16:74408631-74422248 (-)  GRCh38.p2

Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    3 phenotype references
  • All Mutations and Alleles
    3
  • Targeted
    3
  • Incidental Mutations
    APF
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
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  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
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  • All Sequences
  • RefSeq
  • UniProt
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000047805 VEGA Gene Model | MGI Sequence Detail 33507 C57BL/6J ±  kb
transcript OTTMUST00000123056 VEGA | MGI Sequence Detail 2409 Not Applicable  
polypeptide OTTMUSP00000067306 VEGA | MGI Sequence Detail 534 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    132 from dbSNP Build 142
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 2
    cDNA 2

    Microarray probesets 1
References
more
  • Summaries
    All 17
    Developmental Gene Expression 1
    Gene Ontology 1
    Phenotypes 3
  • Earliest
    J:99680 The FANTOM Consortium and RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group), The Transcriptional Landscape of the Mammalian Genome. Science. 2005;309(5740):1559-1563
  • Latest
    J:187047 Gerber SD, et al., Comparison of the gene expression profiles from normal and Fgfrl1 deficient mouse kidneys reveals downstream targets of Fgfrl1 signaling. PLoS One. 2012;7(3):e33457

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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Funding Information
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last database update
08/17/2016
MGI 6.05
The Jackson Laboratory