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BC025920 Gene Detail
Summary
  • Symbol
    BC025920
  • Name
    cDNA sequence BC025920
Location &
Maps
more
  • Sequence Map
    Chr10:81606308-81609836 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 10, 39.72 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    5 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2670983
protein coding gene Chr10:81606270-81620703 (+)
129S1/SvImJ MGP_129S1SvImJ_G0017568
protein coding gene Chr10:82342544-82358470 (+)
A/J MGP_AJ_G0017546
protein coding gene Chr10:79413361-79427523 (+)
AKR/J MGP_AKRJ_G0017507
protein coding gene Chr10:81588802-81606014 (+)
BALB/cJ MGP_BALBcJ_G0017508
protein coding gene Chr10:79638375-79656010 (+)
C3H/HeJ MGP_C3HHeJ_G0017331
protein coding gene Chr10:81698071-81714081 (+)
C57BL/6NJ MGP_C57BL6NJ_G0017962
protein coding gene Chr10:85162584-85176546 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0015651
protein coding gene Chr10:75609659-75623075 (+)
CAST/EiJ MGP_CASTEiJ_G0016898
protein coding gene Chr10:81942456-81964752 (+)
CBA/J MGP_CBAJ_G0017303
protein coding gene Chr10:88506821-88527617 (+)
DBA/2J MGP_DBA2J_G0017409
protein coding gene Chr10:78617753-78631700 (+)
FVB/NJ MGP_FVBNJ_G0017403
protein coding gene Chr10:77887376-77902540 (+)
LP/J MGP_LPJ_G0017480
protein coding gene Chr10:82796674-82810790 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0017429
protein coding gene Chr10:90325601-90343384 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0018003
protein coding gene Chr10:81609397-81624535 (+)
PWK/PhJ MGP_PWKPhJ_G0016679
protein coding gene Chr10:78524604-78542958 (+)
SPRET/EiJ MGP_SPRETEiJ_G0016469
protein coding gene Chr10:80556401-80573583 (+)
WSB/EiJ MGP_WSBEiJ_G0016958
protein coding gene Chr10:81657219-81674187 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    5 phenotypes from multigenic genotypes
    12 phenotype references
  • All Mutations and Alleles
    16
  • Chemically induced (other)
    1
  • Gene trapped
    12
  • Targeted
    2
  • Transgenic
    1
  • Genomic Mutations
    1 involving BC025920
  • Incidental Mutations
    APF
  • Find Mice (IMSR)
Gene Ontology
(GO)
Classifications
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Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • cDNA Data
Interactions
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Sequences &
Gene Models
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  • All Sequences
  • RefSeq
  • UniProt
Representative SequencesLengthStrain/SpeciesFlank
genomic 268319 NCBI Gene Model | MGI Sequence Detail 3529 C57BL/6J ±  kb
transcript NR_030677 RefSeq | MGI Sequence Detail 1906 C57BL/6  
polypeptide Q3US60 UniProt | EBI | MGI Sequence Detail 128 Not Applicable  
For the selected sequence
Protein
Information
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  • UniProt
    1 Sequence
  • InterPro Domains
    IPR036236 Zinc finger C2H2 superfamily
    IPR013087 Zinc finger C2H2-type
Molecular
Reagents
less
  • All nucleic 4
    cDNA 4

    Microarray probesets 2
References
more
  • Summaries
    All 23
    Phenotypes 12
  • Earliest
    J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
  • Latest
    J:254343 Ioris RM, et al., SIRT6 Suppresses Cancer Stem-like Capacity in Tumors with PI3K Activation Independently of Its Deacetylase Activity. Cell Rep. 2017 Feb 21;18(8):1858-1868

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
02/23/2021
MGI 6.16
The Jackson Laboratory