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BC003965 Gene Detail
Summary
  • Symbol
    BC003965
  • Name
    cDNA sequence BC003965
  • Feature Type
    protein coding gene
  • IDs
    MGI:2670966
    NCBI Gene: 214489
  • Alliance
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr17:25184561-25187662 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 17, 12.53 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    38 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2670966
protein coding gene Chr17:25184554-25187662 (+)
129S1/SvImJ MGP_129S1SvImJ_G0023342
protein coding gene Chr17:24228024-24231131 (+)
A/J MGP_AJ_G0023301
protein coding gene Chr17:23553332-23556445 (+)
AKR/J MGP_AKRJ_G0023267
protein coding gene Chr17:23643340-23646447 (+)
BALB/cJ MGP_BALBcJ_G0023306
protein coding gene Chr17:23750020-23753127 (+)
C3H/HeJ MGP_C3HHeJ_G0023066
protein coding gene Chr17:24020714-24023820 (+)
C57BL/6NJ MGP_C57BL6NJ_G0023749
protein coding gene Chr17:25291582-25294682 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0021224
protein coding gene Chr17:21016538-21019584 (+)
CAST/EiJ MGP_CASTEiJ_G0022568
protein coding gene Chr17:23866695-23869808 (+)
CBA/J MGP_CBAJ_G0023041
protein coding gene Chr17:26152514-26155620 (+)
DBA/2J MGP_DBA2J_G0023171
protein coding gene Chr17:23141011-23144124 (+)
FVB/NJ MGP_FVBNJ_G0023141
protein coding gene Chr17:22865811-22869723 (+)
LP/J MGP_LPJ_G0023248
protein coding gene Chr17:24521135-24524242 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0023160
protein coding gene Chr17:25814974-25818087 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0023788
protein coding gene Chr17:23926797-23929910 (+)
PWK/PhJ MGP_PWKPhJ_G0022317
protein coding gene Chr17:21903131-21906293 (+)
SPRET/EiJ MGP_SPRETEiJ_G0022135
protein coding gene Chr17:21999254-22002336 (+)
WSB/EiJ MGP_WSBEiJ_G0022631
protein coding gene Chr17:23998521-24001626 (+)



Homology
more
  • Human Ortholog
    C16orf91, chromosome 16 open reading frame 91
  • Vertebrate Orthologs
    5
  • Human Ortholog
    C16orf91, chromosome 16 open reading frame 91
    Orthology source: HomoloGene, HGNC
  • Synonyms
    CCSMST1, gs103, URLC5
  • Links
    NCBI Gene ID: 283951
    neXtProt AC: NX_Q4G0I0
    UniProt: Q4G0I0

  • Chr Location
    16p13.3; chr16:1419744-1420800 (-)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 214489 NCBI Gene Model | MGI Sequence Detail 3102 C57BL/6J ±  kb
transcript NM_183150 RefSeq | MGI Sequence Detail 3046 C57BL/6  
polypeptide Q6RUT7 UniProt | EBI | MGI Sequence Detail 136 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 40
    cDNA 40

    Microarray probesets 5
References
more
  • Summaries
    All 25
    Gene Ontology 1
    Phenotypes 5
  • Earliest
    J:86784 Bergstrom DE, et al., Overlapping deletions spanning the proximal two-thirds of the mouse t complex. Mamm Genome. 2003 Dec;14(12):817-29
  • Latest
    J:194116 Flachs P, et al., Interallelic and intergenic incompatibilities of the Prdm9 (Hst1) gene in mouse hybrid sterility. PLoS Genet. 2012;8(11):e1003044

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
06/11/2019
MGI 6.14
The Jackson Laboratory