Med13l
Gene Detail

Symbol Name ID

Med13l mediator complex subunit 13-like MGI:2670178

Synonyms

2210413I17Rik, 6330591G05Rik, 9030618F05Rik, mKIAA1025, Thrap2, Trap240L

Feature Type

protein coding gene

Genetic Map

Chromosome 5

59.10 cM
Detailed Genetic Map ± 1 cM


Mapping data(2)

Sequence Map

Chr5:118560719-118765435 bp, + strand From Ensembl annotation of GRCm38   204717 bp   ±  kb flank VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser

Vertebrate homology

HomoloGene:25256  Vertebrate Homology Class
1 human; 1 mouse; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken

Gene Tree: Med13l

Human homologs

Human Homolog		MED13L, mediator complex subunit 13-like
NCBI Gene ID		23389
neXtProt AC		NX_Q71F56
Human Synonyms		PROSIT240, THRAP2, TRAP240L
Human Chr (Location)		12q24.21; chr12:116396381-116714991 (-)  GRCh37.p10
Disease Associations		(1) Diseases Associated with Human MED13L

Alleles and phenotypes

All alleles(43) : Targeted(2) Gene trapped(41)

Gene Ontology (GO) classifications

All GO classifications: (7 annotations)

Process	regulation of transcription, DNA-dependent, regulation of transcription from RNA polymerase II promoter, ...
Component	mediator complex, nucleus
Function	RNA polymerase II transcription cofactor activity

External Resources: FuncBase

Expression

cDNA source data(133)
External Resources: Allen Institute   GEO   ArrayExpress

Molecular reagents

All nucleic(134) Genomic(1) cDNA(133)
Microarray probesets(5)

Other database links

Ensembl Gene Model	ENSMUSG00000018076 (Evidence)
Entrez Gene	76199 (Evidence)
UniGene	206238
DFCI	TC1579297, TC1588282, TC1602490, TC1604311, TC1666856, TC1674094
DoTS	DT.101225314, DT.101736886, DT.40171919, DT.532259, DT.99851399
NIA Mouse Gene Index	U057040, U273291
Consensus CDS Project	CCDS57375.1
International Mouse Knockout Project Status	Med13l

Sequences

Length	Strain/Species
genomic	ENSMUSG00000018076	Ensembl Gene Model | MGI Sequence Detail	204717	C57BL/6J
transcript	ENSMUST00000100816	Ensembl | MGI Sequence Detail	9293	Not Applicable
polypeptide	ENSMUSP00000098379	Ensembl | MGI Sequence Detail	2207	Not Applicable

All sequences(49) RefSeq(2) UniProt(5)

Polymorphisms

SNPs(927 from dbSNP Build 128)

Protein-related information

Resource	ID	Description
InterPro	IPR009401	Mediator complex, subunit Med13
InterPro	IPR021643	Mediator complex, subunit Med13, N-terminal, metazoa/fungi
Protein Ontology	PR:000010285	mediator of RNA polymerase II transcription subunit 13-like

References

(Earliest) J:93290 Araki K, et al., Exchangeable gene trap using the Cre/mutated lox system. Cell Mol Biol (Noisy-le-grand). 1999 Jul;45(5):737-50
(Latest) J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
All references(45)

Other accession IDs

MGI:1918805, MGI:1922081, MGI:1923449