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Sytl5 Gene Detail
Summary
  • Symbol
    Sytl5
  • Name
    synaptotagmin-like 5
  • Synonyms
    ENSMUSG00000054453
  • Feature Type
    protein coding gene
  • IDs
    MGI:2668451
    NCBI Gene: 236643
Location & Maps
more
  • Sequence Map
    ChrX:9885622-9994543 bp, + strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      108922 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome X, 4.62 cM
  • Mapping Data
    2 experiments
Homology
more
  • Human Ortholog
    SYTL5, synaptotagmin like 5
  • Vertebrate Orthologs
    10
  • Human Ortholog
    SYTL5, synaptotagmin like 5
    Orthology source: HomoloGene
  • Synonyms
    slp5
  • Links
    NCBI Gene ID: 94122
    neXtProt AC: NX_Q8TDW5

  • Chr Location
    Xp21.1; chrX:37906068-38129294 (+)  GRCh38.p2

  • HomoloGene
    Vertebrate Homology Class 16345
    1 human;1 mouse;1 rat;1 chimpanzee;1 rhesus macaque;1 cattle;1 dog;1 chicken;1 western clawed frog;1 zebrafish
  • HCOP
    human homology predictions: SYTL5
  • Gene Tree
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000017464 VEGA Gene Model | MGI Sequence Detail 108922 C57BL/6J ±  kb
transcript OTTMUST00000042406 VEGA | MGI Sequence Detail 2301 Not Applicable  
polypeptide OTTMUSP00000019056 VEGA | MGI Sequence Detail 753 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    748 from dbSNP Build 142
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 4
    cDNA 4

    Microarray probesets 1
Other
Accession IDs
less
MGI:3710612
References
more
  • Summaries
    All 20
    Gene Ontology 4
    Phenotypes 2
  • Earliest
    J:169802 Kuroda TS, et al., Synaptotagmin-like protein 5: a novel Rab27A effector with C-terminal tandem C2 domains. Biochem Biophys Res Commun. 2002 May 10;293(3):899-906
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
07/12/2016
MGI 6.04
The Jackson Laboratory