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Serpinb6d
Gene Detail
 Symbol
Name
ID
Serpinb6d
serine (or cysteine) peptidase inhibitor, clade B, member 6d
MGI:2667783
Synonyms Gm11390, SPI3D
Feature Type protein coding gene
Genetic Map
Chromosome 13
13.94 cM
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr13:33661405-33671581 bp, + strand
From VEGA annotation of GRCm38

  10177 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
Protein SuperFamily: serpin
Gene Tree: Serpinb6d
Mutations,
alleles, and
phenotypes
All mutations/alleles(2) : Targeted(2)
Incidental mutations (data from Mutagenetix , APF )
Interactions
Serpinb6d interacts with 31 markers (Mir1a-1, Mir1a-2, Mir20a, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (3 annotations)
Process biological_process
Component cellular_component
Function molecular_function
Expression
Literature Summary: (1 records)
Data Summary: Results (4)    Tissues (4)   
Theiler Stages: 28
Assay TypeResults
RT-PCR 4
cDNA source data(2)
External Resources: GEO   Expression Atlas
Molecular
reagents
All nucleic(4) Genomic(1) cDNA(2) Primer pair(1)
Microarray probesets(1)
Other database
links
VEGA Gene ModelOTTMUSG00000000712 (Evidence)
Ensembl Gene ModelENSMUSG00000047889 (Evidence)
Entrez Gene238568 (Evidence)
UniGene249698
DoTSDT.55149225
NIA Mouse Gene IndexU129835
Consensus CDS ProjectCCDS36631.1
International Mouse Knockout Project StatusSerpinb6d
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000000712 VEGA Gene Model | MGI Sequence Detail 10177 C57BL/6J ±  kb
transcript OTTMUST00000001345 VEGA | MGI Sequence Detail 1463 Not Applicable 
polypeptide OTTMUSP00000000635 VEGA | MGI Sequence Detail 375 Not Applicable 

For the selected sequences
All sequences(17) RefSeq(4) UniProt(1)
Polymorphisms SNPs within 2kb(59 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR023795 Protease inhibitor I4, serpin, conserved site
InterPro IPR023796 Serpin domain
InterPro IPR000215 Serpin family
References (Earliest) J:75161 Kaiserman D, et al., Comparison of human chromosome 6p25 with mouse chromosome 13 reveals a greatly expanded ov-serpin gene repertoire in the mouse. Genomics. 2002 Mar;79(3):349-62
(Latest) J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
All references(18)
Other
accession IDs
MGI:3649829

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
08/26/2014
MGI 5.19
The Jackson Laboratory