About   Help   FAQ
Muc6 Gene Detail
Summary
  • Symbol
    Muc6
  • Name
    mucin 6, gastric
  • Feature Type
    protein coding gene
  • IDs
    MGI:2663233
    NCBI Gene: 353328
  • Gene Overview
    MyGene.info: MUC6
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr7:141634049-141655308 bp, - strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 7, 87.03 cM, cytoband F5
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    24 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2663233
protein coding gene Chr7:141633456-141655319 (-)
129S1/SvImJ MGP_129S1SvImJ_G0033239
protein coding gene Chr7:146837731-146863701 (-)
A/J MGP_AJ_G0033220
protein coding gene Chr7:142637200-142661166 (-)
AKR/J MGP_AKRJ_G0033153
protein coding gene Chr7:146596622-146619681 (-)
BALB/cJ MGP_BALBcJ_G0033221
protein coding gene Chr7:142376005-142397874 (-)
C3H/HeJ MGP_C3HHeJ_G0032936
protein coding gene Chr7:146329634-146352048 (-)
C57BL/6NJ MGP_C57BL6NJ_G0033733
protein coding gene Chr7:152186231-152216080 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0030706
protein coding gene Chr7:143838962-143860360 (-)
CAST/EiJ MGP_CASTEiJ_G0032266
protein coding gene Chr7:138652318-138679734 (-)
CBA/J MGP_CBAJ_G0032908
protein coding gene Chr7:157360589-157388397 (-)
DBA/2J MGP_DBA2J_G0033060
protein coding gene Chr7:140578567-140602464 (-)
FVB/NJ MGP_FVBNJ_G0033013
protein coding gene Chr7:140490308-140516526 (-)
LP/J MGP_LPJ_G0033155
protein coding gene Chr7:148327107-148352376 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0033046
protein coding gene Chr7:157991138-158019008 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0033752
protein coding gene Chr7:145546972-145574374 (-)
PWK/PhJ MGP_PWKPhJ_G0031970
protein coding gene Chr7:133866576-133894835 (-)
SPRET/EiJ MGP_SPRETEiJ_G0031816
protein coding gene Chr7:132387885-132414054 (-)
WSB/EiJ MGP_WSBEiJ_G0032376
protein coding gene Chr7:146504301-146535476 (-)



Homology
more
  • Human Ortholog
    MUC6, mucin 6, oligomeric mucus/gel-forming
  • Vertebrate Orthologs
    7
  • Human Ortholog
    MUC6, mucin 6, oligomeric mucus/gel-forming
    Orthology source: HomoloGene, HGNC
  • Synonyms
    MUC-6
  • Links
    NCBI Gene ID: 4588
    neXtProt AC: NX_Q6W4X9
    UniProt: Q6W4X9

  • Chr Location
    11p15.5; chr11:1012824-1036706 (-)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
Gene Ontology
(GO)
Classifications
less
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
  • All Sequences
  • RefSeq
  • UniProt
  • UniGene
Representative SequencesLengthStrain/SpeciesFlank
genomic 353328 NCBI Gene Model | MGI Sequence Detail 21260 C57BL/6J ±  kb
transcript NM_001330001 RefSeq | MGI Sequence Detail 4571 C57BL/6  
polypeptide NP_001316930 RefSeq | MGI Sequence Detail 1437 C57BL/6  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 5
    cDNA 4
    Primer pair 1

    Microarray probesets 2
References
more
  • Summaries
    All 20
    Developmental Gene Expression 2
    Phenotypes 3
  • Earliest
    J:65007 Cattanach BM, et al., Two imprinted gene mutations: three phenotypes. Hum Mol Genet. 2000 Sep 22;9(15):2263-73
  • Latest
    J:179732 Stringer EJ, et al., Cdx2 determines the fate of postnatal intestinal endoderm. Development. 2012 Feb;139(3):465-74

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
11/06/2018
MGI 6.13
The Jackson Laboratory